Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01626 ATGGGAAATCGGAAGACAGAAGAAGAAAGGATTGAAAAAGTAATTCGGAGCCTTCTAAAACTCTCCGAAAATAGAAGATGCATCAACTGCAATCTTTTGGCACACATGCATGTAACATTTTCAGATGACAGTGTATCTAAAATAACAAGTATTCTTATGAATCAGGGACCGCAATATGTGTGTACAACTTTCTCCACATTTGTCTGCACAAATTGCAGTGGCATACATCGAGAGTTTACCCACAGAGTAAAATCTGTCTCAATGGCTAAATTTACTCAAGAAGAAGTCACTGCTCTTCAAGCAGGTGGAAATGAGAGAGCAAGCCAGATTTATCTTAAAGAATGGGATCCTCAGTGCAATTCTAAACCAGATTCCAGTGATATACAAAAACTTCGAGAATTCATTAGGAAAGTGTATGTAGAAAGAAGATACAGCGCTGACCATAGCAGCAGTAGTGGTCTTTCGAGGATTAGATTGACTGAGAAGGAGTCTGATGCAAGTAAGAGGAGTAGTTCATTTCGTTTAGAGCTCATAAGTCCACATTCAAGTCCTGGACCAAGAAGTGAGGATAAGAATTTGAGATTTTTATATGATGAAAGCAGAAGCCCCAGATATGCACAAAGGTATGCAAGGCATGGAGGCCAAGTCAGAAGTCCTATTCAAATTGAAGTTGTTGATGACAGGTTCCGAGACGATGAACGTAGAAATCGAAGGATTTTGAATATAGAAGCAAAGCTAAAGAAAGTTTCAACTGATGATCAGAAGAATGTGGACAGATCCCAACTCCCTGTTGTACTTCCTGTGGGTGAAGTGTCAAGGGAGAAAGCTCAACCTCCACAAATCAAACATTCGGGTGGCAAGGGTTCTGTTGAGGAAAAACCATCTGAACGAAACAATAATATTCCAGAAACACCACCACCTACAACACAATCAAATGAAAGTAACTGGGCCATATTTGACGCTTCAACAGAGAACAATGATCCTAAAATTCCAGAAACAAATACCTCTAAACCTTCTACAGCAATGGTAGCATCTGAACCACCAGCACCTGCAAAAAATCCCATAGACCTTTTACTTTTTGAATTGTCAGGCCCTGTGGCTCCGGTGACCAGTGGCATGCCACAAGTTCCAAGTAATGTTAATAATGATTCAACAATAACAACAGTACAAAATGCTATTACTTGGGACTTTCCACCCACTTCAACAGGGAACACAACTGCATCATCCAACAATACTAGTGTTTGGCCATGTGCATCAACCCCAGCCACTGACACAGCACAACCTTCTAATGAACTTCCTCCACATACGGAAGTTTCACATGCACATAATCCATCAAGCATGCAATATCTTCCATCTATATCGGTAGGCTTTAATTCAACCACACAACCAACAAATTCACTAGTCAAAGATGTAGCTTCAACTAATCAGACACGGCCATCAGTAGCTCCTTGCGGAAATGATTCTTCATGGTCTTTGACTGAATTATCCTCTCAAACTACCTCAAAACCCACTCAAGAAACCAGACCTGATGTTGGCTCCCAGCCCAGTAAAGTGGAAATTTGGGCAAGTGGAAGACAGGAACTACCAGAGGACCTTTTCATATCAAGCTTTTTATCTGGCCCAGCACCACTTCCAAGTTGGCAGAATGTTCAACCTCATGGCATGGGATATGGCATGCAGTATTATCATAATGCAGCGCCTCCCCCTGCCCTTTCAAATTCACCAAAGTCCACAAACCCCTTTAATGTAACTGATGGGAGAAGTATAATCCATGCTTCATCGCTTCCCTCTATAGCATGTGTGCACGGTGCACCACCAGTTGTATCATCACCCAGAACAGGATTGATACATACTACAAGTCTCGGGTCTTTGGTGTCTCAGTCCCCAAGTTATACATCACCAGTTCCAATGGGTATGTACTTTGATCAAGTTAATAATGAGAAGCGACCCACTAGACCACAGAGAGTTGAAAGCTTCAATGGTGAGATAACTGGTTTTGGATCTATAGACCCTATTCAACAGTCAAATAGAGGATTCATGACCTCCCAAAGAACAAATTCTTTTTCCAATACAAGTGGAAACCCATTTGACTAG 2094 0.415 MGNRKTEEERIEKVIRSLLKLSENRRCINCNLLAHMHVTFSDDSVSKITSILMNQGPQYVCTTFSTFVCTNCSGIHREFTHRVKSVSMAKFTQEEVTALQAGGNERASQIYLKEWDPQCNSKPDSSDIQKLREFIRKVYVERRYSADHSSSSGLSRIRLTEKESDASKRSSSFRLELISPHSSPGPRSEDKNLRFLYDESRSPRYAQRYARHGGQVRSPIQIEVVDDRFRDDERRNRRILNIEAKLKKVSTDDQKNVDRSQLPVVLPVGEVSREKAQPPQIKHSGGKGSVEEKPSERNNNIPETPPPTTQSNESNWAIFDASTENNDPKIPETNTSKPSTAMVASEPPAPAKNPIDLLLFELSGPVAPVTSGMPQVPSNVNNDSTITTVQNAITWDFPPTSTGNTTASSNNTSVWPCASTPATDTAQPSNELPPHTEVSHAHNPSSMQYLPSISVGFNSTTQPTNSLVKDVASTNQTRPSVAPCGNDSSWSLTELSSQTTSKPTQETRPDVGSQPSKVEIWASGRQELPEDLFISSFLSGPAPLPSWQNVQPHGMGYGMQYYHNAAPPPALSNSPKSTNPFNVTDGRSIIHASSLPSIACVHGAPPVVSSPRTGLIHTTSLGSLVSQSPSYTSPVPMGMYFDQVNNEKRPTRPQRVESFNGEITGFGSIDPIQQSNRGFMTSQRTNSFSNTSGNPFD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01626 697 MobiDBLite consensus disorder prediction 667 697 - -
Spst8g01626 697 Pfam Putative GTPase activating protein for Arf 55 146 IPR001164 GO:0005096
Spst8g01626 697 CDD ArfGap_AGFG 12 144 - -
Spst8g01626 697 MobiDBLite consensus disorder prediction 659 697 - -
Spst8g01626 697 MobiDBLite consensus disorder prediction 302 342 - -
Spst8g01626 697 MobiDBLite consensus disorder prediction 170 192 - -
Spst8g01626 697 MobiDBLite consensus disorder prediction 473 512 - -
Spst8g01626 697 Coils Coil 4 24 - -
Spst8g01626 697 MobiDBLite consensus disorder prediction 268 348 - -
Spst8g01626 697 Gene3D Arf GTPase activating protein 1 157 IPR038508 -
Spst8g01626 697 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 152 IPR001164 GO:0005096
Spst8g01626 697 PRINTS HIV Rev interacting protein signature 83 104 IPR001164 GO:0005096
Spst8g01626 697 PRINTS HIV Rev interacting protein signature 65 82 IPR001164 GO:0005096
Spst8g01626 697 MobiDBLite consensus disorder prediction 400 447 - -
Spst8g01626 697 SUPERFAMILY ArfGap/RecO-like zinc finger 11 146 IPR037278 -
Spst8g01626 697 SMART arf_gap_3 12 152 IPR001164 GO:0005096
Spst8g01626 697 PANTHER ARFGAP/RECO-RELATED 1 696 IPR044820 GO:0005096
Spst8g01626 697 MobiDBLite consensus disorder prediction 473 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01626 Spst-Chr8 18753692 18758841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01626 15 144 C2H2 Transcription Factor Family AT4G21160 29.412 6.47e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01626 - - vun:114194797 920.998