Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01604 ATGACTTCCATGAATTTATTCACCACCATTTCCCTCGCCGCCGACGGCCGAAATCCGACCACCTGTTTTCCCAGGCGGCGTCCCAACACCGTTGCTCTCGCCTCCACTTCGGCGGAATCTCCTCCCGAAATAGAGCTCGAGTTCATCGGGCCGAAAGCGGGAAGTGAGGGGAAGAATCCGGTGGAGAAAGCAAAAGCGAAAAGCGGAGAGAAGCTGTTGAGGAACATCATGTTGGATAACAAGATCGAGCTTTATGCCACCTATGGGAAACTGATGAACTGCGGAGGAGGTGGTAGCTGTGGAACTTGCATCGTAGAGATTATTGAAGGAAAGGATCTTTTAAATGAAAGAACCAATACTGAACTCAGATATCTTAAGAAGGCATGCTTGCTCTTCCTCTTAAAGTCACCGCACAAGAATAAGCCTGAATCTTGGAGGCTGGCTTGTCAAACTATTGTTGGAAACAAAGAAAACTCTGGCAAGGTTGGTGTTGATCTTCCAGGCATGAAAGACGGTGTTCGAGTGACGCGAGCAATGGCGAGAGCTGTGAGAAAGGTTTCTGTCTCTTCAAGAGCGCACTTTAAGAAGCCGCACAAATTGGATAAGAGCAGAGCCGCGCTGAGCGATGTAACTAATGTATGCAGTGCTACATCCAAATTTCAGGTATACATTAAATTGTTGTCTTTTGGGGTTGAAATTTTCGTGGGGTTCTTGATATTGCTGGCTTATGTTGCCACAGTTGAGGCGGCATACACCCTAAAAAGTTTAGCATTGTGGCCAAAATCGCAGTGCTGGATATTTACAAGAGGAGATTATAAGAAGCGAAGTACAAAGGGAGCTTGTAATGTCTCCATGCAAGTTTTGTCAATTGAAGAAGATGTTAGAGCAAAGTCAGCGAAAGATTTATCCACAATATCGCTGGTACAGTCACATGATGATGTTGTAGCTGAAAGGCTGGAAGACAGAGAGCTAGTGCAACCTTCTATGTCTGTCATGGCAGGACCCCTGCTTTCAATGCAGGACTCTATGAAGTCTGATGAACTCCTTGGCTCTCCAAATCAAGACATTGATATGATTTCAGAGAAACTAAAACATTCGGATGATGTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAAGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAATATATGTGTCCGAGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGTTTTCTTTCTCAAAGTTTTATTCAGAAACAAGGACTGCAATTACTGGGTGTTACATGCATGCTGATTGCATCGTTTCATATGGTTCCAATTGAGGTATGGGGGCTTGAGTCCGTCCCCCACATTGAAATAGATTCTAGGGAGGTTTATAAGGTCGTGGGTAGAGAGTTGGTGAATCTAAAGTATGAAGAGATTTGTGCTCCTCGAGTAGAAGAATTTTGCTTCATAACAGACAATACGTACACAAAAGCAGAGGTACTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAATTATCGGTTCCCACCGCTAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATATTCTTTTGAGGTCTCTTATGTTGAAGTGGAATTTCTGGCAAATTATTTAGCAGAGCTCACTCTTGTTGAATACAGCTTCTCGCAGTTTCTACCTTCCCTGATAGCTGCGTCTGCTGTATTACTTGCGAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACTATGGAACATTATACGAAGTACAAAGTGTCAGAGCTTAAAACTACTGTCCTTGCTCTGGCAGATTTGCAGATTGATAACAAAGGCTGTCCTCTGAATGCTATACGTGAAAAATATAAACAGCAGAAGTTCATGAGCGTGGCAAATTTGTCTCCAAAACCAGTGCAGTCACTTTTCGAGGCTGAAGTATAA 1974 0.4316 MTSMNLFTTISLAADGRNPTTCFPRRRPNTVALASTSAESPPEIELEFIGPKAGSEGKNPVEKAKAKSGEKLLRNIMLDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELRYLKKACLLFLLKSPHKNKPESWRLACQTIVGNKENSGKVGVDLPGMKDGVRVTRAMARAVRKVSVSSRAHFKKPHKLDKSRAALSDVTNVCSATSKFQVYIKLLSFGVEIFVGFLILLAYVATVEAAYTLKSLALWPKSQCWIFTRGDYKKRSTKGACNVSMQVLSIEEDVRAKSAKDLSTISLVQSHDDVVAERLEDRELVQPSMSVMAGPLLSMQDSMKSDELLGSPNQDIDMISEKLKHSDDVGIVDIDSVELKDPQVWSSYAPDIYNNICVREVSEEYKLVPDTLYLTVNLIDRFLSQSFIQKQGLQLLGVTCMLIASFHMVPIEVWGLESVPHIEIDSREVYKVVGRELVNLKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTAKTFLRRFILAAQYSFEVSYVEVEFLANYLAELTLVEYSFSQFLPSLIAASAVLLARWTLNQSEHPWNSTMEHYTKYKVSELKTTVLALADLQIDNKGCPLNAIREKYKQQKFMSVANLSPKPVQSLFEAEV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01604 657 Pfam Cyclin, C-terminal domain 524 646 IPR004367 -
Spst8g01604 657 Gene3D - 517 652 - -
Spst8g01604 657 Pfam 2Fe-2S iron-sulfur cluster binding domain 91 153 IPR001041 GO:0051536
Spst8g01604 657 SUPERFAMILY 2Fe-2S ferredoxin-like 72 154 IPR036010 GO:0051536
Spst8g01604 657 Gene3D - 395 516 - -
Spst8g01604 657 CDD CYCLIN_AtCycA-like_rpt2 524 638 - -
Spst8g01604 657 Pfam Cyclin, N-terminal domain 399 522 IPR006671 -
Spst8g01604 657 SMART Cyclin_C_2 524 647 IPR004367 -
Spst8g01604 657 SUPERFAMILY Cyclin-like 481 521 IPR036915 -
Spst8g01604 657 PANTHER CYCLINS 395 635 IPR039361 -
Spst8g01604 657 SUPERFAMILY Cyclin-like 381 445 IPR036915 -
Spst8g01604 657 Gene3D - 54 173 IPR012675 -
Spst8g01604 657 FunFam Cyclin A1 511 643 - -
Spst8g01604 657 SMART cyclin_7 528 616 IPR013763 -
Spst8g01604 657 SMART cyclin_7 396 515 IPR013763 -
Spst8g01604 657 SUPERFAMILY Cyclin-like 523 646 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01604 Spst-Chr8 18482572 18498510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01604 366 653 Core Cell Cycle Gene Families AT5G25380 54.375 2.06e-102 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01604 K06627 - gmx:100777132 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01604 8 18482572 18498510 Spst9g00834 9 7279335 7284833 PCT