Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01580 ATGTTTTTTTACTTTCTATGTCAACTTCTGTTCACACAGTCCTCACTGGATCTCTATTTGTGTGCTTTGGCTATTCTTGGGATTATGTTGCCAGCTCAAGGAAGATGGCTCTCAAAATTTCTACGTAATAGTATCCAGCTGTTGCGTGTTATTGTGGCTATTATTCTTCAAACAAAACTAGAAAGCGTTCCAGCAGCAAATATCTATGCACCAGAGTCTCTTAGGACTGGATATTCAATCTTTGCTTCGGGATTAATTGTGGGCTTTGCTAATCTTGTTTGTGGGTGTGTATTCTTTCTTACCTACCTCATTATTCTCCTGATGAATACAGGGGACCTTTTCCATCCTGATGTTACATATTCAATTTTTTCCGCCTCTGGCAGGTTGTGTGTAGGAATAATTGGAAGCAGCTGTGCATTATCTGATGCTCAGAACTCCTCCCTCTTAGTGAAAATTCTTGTCATTGAGATCTTCGGTAGCGCGCTTGGGCTATTTGGAGTGATTGTTGGAATTATCATGTCAGCACAAGCAACATGGCCAAGAAAAGTTTAA 552 0.4022 MFFYFLCQLLFTQSSLDLYLCALAILGIMLPAQGRWLSKFLRNSIQLLRVIVAIILQTKLESVPAANIYAPESLRTGYSIFASGLIVGFANLVCGCVFFLTYLIILLMNTGDLFHPDVTYSIFSASGRLCVGIIGSSCALSDAQNSSLLVKILVIEIFGSALGLFGVIVGIIMSAQATWPRKV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01580 183 Pfam ATP synthase subunit C 126 173 IPR002379 GO:0015078|GO:0033177|GO:1902600
Spst8g01580 183 Gene3D - 37 102 IPR035921 -
Spst8g01580 183 Gene3D - 118 179 IPR035921 -
Spst8g01580 183 CDD ATP-synt_Vo_c_ATP6F_rpt2 76 173 - -
Spst8g01580 183 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 126 177 - -
Spst8g01580 183 SUPERFAMILY F1F0 ATP synthase subunit C 129 174 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01580 Spst-Chr8 18094652 18095601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01580 43 182 Primary Pumps ATPases(2) AT4G32530 68.085 2.86e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01580 K03661 - gmx:100778175 171.014