Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01572 ATGGTAGTGTTTTGGACTGGACTATCTTATACTTTACCAGGTAAAATTCCATCTGCTGTTCCTAGAAGGCTGGTTTGTCCATTTCCATGGGAAGCCGCTTCTGTCTACCACTGGACAGTAATAAAGGATATGGGAAAGGTACCCCCGGTTTACATCTTTGCAGCATTTATCCCAGCGGTGATGATAGCAAGTTTATACTTCTTTGATCATAGTGTAGCTTCTAAGATGACTCAACAGAAGGAATATAATCTTCAAAAACCATCTGCTTATCACTATGATATTTTCCTTCTTGGTATACTGACTTTGATTTGCGGCCTTCTTGGCCTTCCTCCATCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTAAGGAGGCAGATGATCCGAAAGAAAGTGGTAAAAACTGCCAAGGAATGCATTAAGGAACAAGGAAGCACCACTGAGTTATATGGAAAGATGCACGCTAATCAAGAGTTGGAGAACTTGAAGGAGGCTGTAAAGAAATCTACTGAAAGGGATGGTGAAAAGAAATTTGATTTTGATGTACACATGGATGCCTATATACCTGTCCGTGTTAATGAGCAAAGAATGAGTAACTTATTGCAGTCTCTCTTGGTTGGCCTATTGACATTTGCCGTTTATATCATCAAAATGATACCTACTTCAGTTCTGTGGGGATATTTTGCATACATGGCTATTGATAGTCTCCCAGGGAATCAATTCTATGAAAGGATATTGCTTCTCCTCATCTCACCAAACCGGCGCCACAAAATTTTGGAAGGGCCTCATGCCTCGTTTGTGGAATCAGTACCATTCAATACCATAGCTACATTCACAATCGTACAGATTGTGTACTTTTTAATATGTTATGGGGTGACATGGATACCTATAGGAGGAATACTTTTCCCATTACCTTTCTTCTTGCTCATAACTATAAGAGAGCACTTGCTTCCAAGGCTATTCAAGCCTGATCATCTTCAAGAACTAGATGCTGTTGAGTACGAGGAAATTATTGGAGCTCCATATGTGAACAACTGCGGTGATGAAAAGCACATGGAAGATTATTATGATGCAGAGATATTGGATGAGATGATAACTCGCAGGGGACAATTGAAGCTCAGAACCATGAGCCGAACTAACAGTAGAAGCTTCAGCTACAGCTTCTCTGAAGACAGGCCACAATAG 1203 0.4098 MVVFWTGLSYTLPGKIPSAVPRRLVCPFPWEAASVYHWTVIKDMGKVPPVYIFAAFIPAVMIASLYFFDHSVASKMTQQKEYNLQKPSAYHYDIFLLGILTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQMIRKKVVKTAKECIKEQGSTTELYGKMHANQELENLKEAVKKSTERDGEKKFDFDVHMDAYIPVRVNEQRMSNLLQSLLVGLLTFAVYIIKMIPTSVLWGYFAYMAIDSLPGNQFYERILLLLISPNRRHKILEGPHASFVESVPFNTIATFTIVQIVYFLICYGVTWIPIGGILFPLPFFLLITIREHLLPRLFKPDHLQELDAVEYEEIIGAPYVNNCGDEKHMEDYYDAEILDEMITRRGQLKLRTMSRTNSRSFSYSFSEDRPQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01572 400 Coils Coil 158 178 - -
Spst8g01572 400 PANTHER ANION EXCHANGE PROTEIN 1 344 IPR003020 GO:0005452|GO:0006820|GO:0016020
Spst8g01572 400 Pfam HCO3- transporter family 196 287 IPR011531 GO:0006820|GO:0016020
Spst8g01572 400 Pfam HCO3- transporter family 38 134 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01572 Spst-Chr8 17695400 17697927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01572 1 389 Antiporters AT4G32510 60.664 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01572 K24194 - gmx:100808880 575.089