Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01568 ATGCCAAAGAAGAAGAATTGTCTGGTGTTTATGGATGTGTCCTTAGATGGGGATCCTGTAGAAAGAATGGTTTTTGAGCTTTTCTATGATGTTGCTCCAAAGACTGCTGAAAATTTTCGAGCCTTATGCACAGGAGAAAGGGGAGTTGGTACAAATTCTGGAAAGTTGCTGCACTACAAGGGTTCATTCTTCCATCGAATTGTAAAAGGCTCCATTGCCCGCGGTGGAGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTATGCTAAAGCACGATGCTCCAGGCCTTCTTTCCATGCCAGTTGCTGATCGTGACACACATGGTTCTCATTTTATAATCACATTTAAAGCTGATCCTCATCTTGATAGGAAACATGTAGTATTTGGCAAGCTTGTGCAAGGGCATGATATATTGAAGAGAATTGAAGATGTAGGTGATGAAGAAGGATTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGGAAAGAAGATAAATAAGTCAAAAAAGGGAAGAGATGTATCTACTGAAACCAATAGTCCTGAACTGCGTAGGGGAAAGCACAAAAAATCCTCTGGTGACAAAAGGAAAAGGAGAAAGTACTACACATCAGAATCGGATAGTTCCTCAGATTCAGACACGAAATCATCAGAAAGTGATAGTGATTCAGATTCAGATATATCTTCATCATCTTACACAAGTTCTTCCAGTGATGACAGGCGGAGAAAGAGAAAGAGGTCTAGGAAAGATAAACATAGACGTGGAAAAAGAAGAGACAAACAGCGAGAGAAGAGACGAAGGATCCAAGACAAAAGATCAAAGTTTAAATCAAGAAGGGAATTGACCCGTCATACCAATTCAGACAGTGAAAATAAGAGTGGCAACAGCTCTGATAGTGAAAGTTGTGGTGCTCAAGTGAAAGAACAGAAGCATAAAGATCATTCTCAGAAACGTGCTGAAGGTCAGTCTTCCTTGGCTGTGGAGAAAGAATTACCTCCCAAACTCTTTACAAAGGGGGAGAAACTGGATATGCTAGAGGAGGAAGAATTCCCAAAGGAAAATGGAGAGCGTCATAGCAATGGCATTGAAGCCAACTATAGATCTGACAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATTTGATGAGCAGGAGTCAAAGCATGAGTATTAGTCCAAAGCGTGAGAGCAGAAGCCCAAGCATTAGTCGAAAAAGGAGGTTGAGTAGAAGTCCTAGTGGCAGTAGAAGCCCTCGAGCTCCATTACGGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGCATAAACAGGAGTCCAAACAGAAGAATCAGCAGCAGAAGCCCAGCAAGAGGTAGGAAGGGAAAAAGTGTCAGTAGAAGCCCTGTGAGATCTGGTGGATATAGAAGTGTCAGTGCAAGCCCTGTAAGATCCATTTCTCGGATCCACCAGAGGAATTCACCCAGAGCACCATCACGAAGATCAATCAGCAGGAGCCCTGTGAGGAACCACAATCATAGGAGTCTCAGTAGAAGCCCTGTGAGATCTCGTGGTCGTAGAAGTGTCAGTACAAGCCCTGTAAGATCCCTTTCTCGCAGCCACCGGAGTTCACCCAGAGCACGATTACAAAGATCAATCAGCAGAAGCCCTATGAGAACACACAATCATAGAAGTGTCAATAGAAGCCCTGTGAGATCCAGTGGTAGAAGAAGTGTCAGTGCAAGCCCTCTAAGATCCATTTCTCGGGGCCGTCGGAGGACTTCACCCAGAGCACCATCACGAAGATCAATCAGTAGGAGCCCAGTGAAAACTGATTATCACAGAAATATAAGTAGAAGCCCTGTGAGATCTCATGGTCATAGAAGTGTGAGTGCAAGCCCTGTAAGATTACCTTCTCGGGGCGTCCGGAGGAGTTCACCCAGAGCACTATCACGAAGATCAATCAGCAGAAGTCCTGCAAGAGTGTCAAGAAAGAGTATAAGTAGGAGTCCAGTTAGGTCATCAGCCAGAAGCTTGAGCAGAAGCTCTGGCAGGGTCCCTTTGAGAAGCATTAGCCGAAGTCCAGTTAGGATGCCAAGCAGAGGCAATCGCCGTAGTTATTCAAGGAGTCCTCGGAGGAGCTTGTCTAGAAGTGTGTCACCTGGTGTTTCCCCAAAACGTATCCGAAGGGGAAGAGGTTTCAGTGAACAGTACTCGTATGCTAGAAGGTATAGGACTCCTTCCCGATCTCCTGTGAGATCGTACCGCTATAATGGAAGAAGTTACCGGGACAGATATTCAGGTTATAGGAGGTACTCCCCTAGGCGTAATAGGAGCCCACTGCCACGCAGAAGAACTCCACCGAGGTTCCGGAGTAGGAGGAGCAGGACACCATCTGTATCACGCAGTCCACGTTATCGAGTTCGTCGCTATAGTCGAAGCCGCAGCCCTTTGGGCAGTCGTTCACCTGTTGGTACATATCGACGTCGTGTTCAGAGGAGCAGGTCTCTGTCCCGGAGCCGGAGTCCCTCACGATCCAGGGCGTCAGTAGAATCAGAATCTCCACGAAATGCGAGCAGGAACAGCAGGTCAAGGTCCCCAAGGTCCCGGTCTGAAAGCCCAGATGGGAAGAAAGGCCTTGTATCTTACGGAAATGGTTCTCCCGATTCAAACTAA 2697 0.4613 MPKKKNCLVFMDVSLDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGTNSGKLLHYKGSFFHRIVKGSIARGGDFVNRNGTGGESIYGSKFPDESPMLKHDAPGLLSMPVADRDTHGSHFIITFKADPHLDRKHVVFGKLVQGHDILKRIEDVGDEEGFPSVTVKIINCGEHNEDGKKINKSKKGRDVSTETNSPELRRGKHKKSSGDKRKRRKYYTSESDSSSDSDTKSSESDSDSDSDISSSSYTSSSSDDRRRKRKRSRKDKHRRGKRRDKQREKRRRIQDKRSKFKSRRELTRHTNSDSENKSGNSSDSESCGAQVKEQKHKDHSQKRAEGQSSLAVEKELPPKLFTKGEKLDMLEEEEFPKENGERHSNGIEANYRSDRSEGRQPDVMDLMSRSQSMSISPKRESRSPSISRKRRLSRSPSGSRSPRAPLRRSLSRSPVRSINRSPNRRISSRSPARGRKGKSVSRSPVRSGGYRSVSASPVRSISRIHQRNSPRAPSRRSISRSPVRNHNHRSLSRSPVRSRGRRSVSTSPVRSLSRSHRSSPRARLQRSISRSPMRTHNHRSVNRSPVRSSGRRSVSASPLRSISRGRRRTSPRAPSRRSISRSPVKTDYHRNISRSPVRSHGHRSVSASPVRLPSRGVRRSSPRALSRRSISRSPARVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRMPSRGNRRSYSRSPRRSLSRSVSPGVSPKRIRRGRGFSEQYSYARRYRTPSRSPVRSYRYNGRSYRDRYSGYRRYSPRRNRSPLPRRRTPPRFRSRRSRTPSVSRSPRYRVRRYSRSRSPLGSRSPVGTYRRRVQRSRSLSRSRSPSRSRASVESESPRNASRNSRSRSPRSRSESPDGKKGLVSYGNGSPDSN 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01568 898 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 MobiDBLite consensus disorder prediction 215 239 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 305 320 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 822 871 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 321 336 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 477 512 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 783 807 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 513 528 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 176 898 - -
Spst8g01568 898 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 350 394 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 429 460 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 258 290 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 397 413 - -
Spst8g01568 898 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Spst8g01568 898 MobiDBLite consensus disorder prediction 529 547 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 656 696 - -
Spst8g01568 898 Gene3D - 1 182 IPR029000 -
Spst8g01568 898 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Spst8g01568 898 MobiDBLite consensus disorder prediction 176 205 - -
Spst8g01568 898 MobiDBLite consensus disorder prediction 574 596 - -
Spst8g01568 898 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01568 Spst-Chr8 17578274 17585051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01568 2 170 U-box Gene Family AT5G67530 38.596 2.00e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01568 K09566 - gmx:100801588 676.781