Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01567 ATGGCAAAGAAGAAGAATTGTCTGGTGTTTATGGATGTGTCCATTGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTCCGATGTTGCTCCAAAAACTGCTGAAAATTTTCGTGCATTATGCACAGGAGAAAGGGGCGTGGGTCCAAATACTGGAAAAGCACTGCACTACAAGGGGTCATTCTTCCATCGAATTGTGAAAGGATCTGTTGCCTGGGGTACAGGGCTGATGGTCACGACTGCCTTTCTTGGTGGTGATTTTGTAAATCGAAATGGTACGTATGGTGCTGTCTCCTCCAACCCATTGGGTCACACTTGCGCTACTGAGATTGCAGTTGATATGATGAGTTTTTCACATGGTACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTAGGCTAAAGCATGATACTCCAGGCCTTCTATCCATGCCAGTTGCTGTTCGTGACACTCATGGTTCTCATTTTATCATTACTTTTAAAGCTGATCCCCATCTTGATAGGAAACATGTAGTCTTTGGCAAGCTTGTGCAAGGGCATAATATATTAAAGAAAATTGAAGATGTGGGTGATGAAGAAGGACTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGCGAACATAATGAGGATGGAAAGAAGATAAAGAAATCAAAAAAGGGAAGAGATGGGTTTTCTGAAACCAATAGTCATGAACTGCATAGGGGAAAGTACAAAAAATCTTCAGGAGACAAAAGGAAAAGGAGAACGTACTATTCATCAGAATCTGATAGTTCCTCAGATTCAGACAAGCAATCTTCAGAAAGTGACTATGATTCTGACTCAGATATATCTTCATCATCTTACACAAGTTCCTCCAGCGAAGACAGGCGGAGAAAGAGAAAGAGATCTAGAAAAGATAAACATAGACGTGAAAAAAGAAGAGAGAAACATCGAGAGAAGAGACAAAGGAAACAAGACAGAAGGTCAAAGCGTAAATCAAGAAGGGAATTGACCAGTCATACTGATTCAGATGAAAGTAAGAGTGGCAACAGCTCTGGTGGTGAAAGTTGTGGTGCTCGAGCAAAAGATCGGAGGCATAAAGATAATTCTAAGAGACCTGCTGAAGGTCAGTCTTCCTTAGTAGTCGAGAAACAATTACCTCCCAATGACCTTAAAAAGAAGGAGAAACTGGATATGCTAGAGGAAGAATTACCAAAGGAGAATGAAGAGCGATATAGCAATGGCATTGGAGCCAACTATAAATCTGACAGAAGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAGGCAAATCTAGGAGTCAAAGCATGAGCATTAGTCCCCGGAGTGCGAGCAAAAGCCCAAGTAGTCCAAAAAGGAGCGCAAGCAAAAGTCCAGGTTGCAGTGGTAGCCCTCGGGCTCCATTACGCAGGAGTTTGAGCCGAAGTCCTGTTAGAAGCACAAGCAAAAGTCCAAACAGAAGAAGCATCAGCAGAAGCATAGTGAGAGGTAGGAAGGGAATAAGTTTCAGTAGAAGCCCTGTGAGATCTCGAGGGGATAGAAGTGTTAGTGCAAGCCCTGTAAGATCCCTTTGCCAGAGCCAGCAGAGGACTTCACCCAGAGCAGCATCACGAAGATCAATCAGCAGAAGTCCTGTGAGATCTCGTGGTCATAAAAGTGCCGGCCCAAGCCCAGGAAGATCCCTTTCTCGGGGTCGTGTGAGGACTTCACCCAGAATGCCGTCACGAACATCAATCAGCAGAAGCCCTGTGAGATCCCCTGGTAGTAGAAGTGTCAGTAGAAGCCCTGTGAGATCCCCTGGTAGTAAAAGTGTCAGTGCAAGTCCTGTAAGATCCCGGAGCCACCGGAATTCACCCAGAGCGTTGTCACGAAGATCAATCAGCAGAAGCCCTGTGAGAACTCACAATCATAGAAGTGTCTATAGAAGCCCTGTGAGATCTCGTGATCATAGAAGTGTCAGTGCAAGCCCTATAAGATCTCTTTCTCGGAATCGCAGGAAGAGTTCACCAAGATCATCATCACGAAGATCAATCAGTACAAGCCCTGTGAGAACTTACAATCATAAAAGTTTAAGTAGAAGCCCTGTGAGATCTCATCGTCGTAAAAGTGTGAGTGCAAGCCCTGTCAGATCTTTTTCTCGGGGCTGCCAGAGGAGTTCACCTAGAGCACCATCACGAAGATCAATCAGCAGAAGCCCAAGAGTGTCAAGAAAGAGTATAAGCAGGAGTCCAATTAGATCATCTGCCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCATTAGCCGAAGTCCAGTTAGAGTGCCAAGCAGAGGCAATCGGCGCAGTTATTCTAGGAGTCCTCGGGGCAGGAGCTTATCTAAAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCCGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGGTCATACCGCCATAATGGAAGAAGTGACCGGGACAGATATTCAGGTTACAGAAGGTACTCCCCTAGGCGTAACAGGAGCCCACCTCCACGAAGAAGAACTCCACCAAGGTTTGTCTTTTGTAAATGTTCCGGAGTAGGAGGAGCAGGACGCCTTCTGTATCACGCAGCCCACGTTACCGAGCCCGACATTATAGTCGAAGCCGTAGTCCTGTACACAGCCGTTCACCTGTCAATGCATATAGACCTCGTGCTGAGAGGAGCAGGTCTTTGTCCCGGAGCAGGAGTCCTTCACGATCCAAGGCTTCAGTGGAATCAGAATCTCCACGGAATGCGAGCAGGAACAGCAGGCCAAGGTCCCCAAGGTCCCAGTCTGAAAGCCCAGATGGGAAGAAAGGGCTTGTTTCTTATGGAGATGGTTCCCCCGATTCAGGCTAAAGGTGGAATACACTTGTGA 2946 0.462 MAKKKNCLVFMDVSIDGDPVERMVFELFSDVAPKTAENFRALCTGERGVGPNTGKALHYKGSFFHRIVKGSVAWGTGLMVTTAFLGGDFVNRNGTYGAVSSNPLGHTCATEIAVDMMSFSHGTGGESIYGSKFPDESPRLKHDTPGLLSMPVAVRDTHGSHFIITFKADPHLDRKHVVFGKLVQGHNILKKIEDVGDEEGLPSVTVKIINCGEHNEDGKKIKKSKKGRDGFSETNSHELHRGKYKKSSGDKRKRRTYYSSESDSSSDSDKQSSESDYDSDSDISSSSYTSSSSEDRRRKRKRSRKDKHRREKRREKHREKRQRKQDRRSKRKSRRELTSHTDSDESKSGNSSGGESCGARAKDRRHKDNSKRPAEGQSSLVVEKQLPPNDLKKKEKLDMLEEELPKENEERYSNGIGANYKSDRSEGRQPDVMDDQPGKSRSQSMSISPRSASKSPSSPKRSASKSPGCSGSPRAPLRRSLSRSPVRSTSKSPNRRSISRSIVRGRKGISFSRSPVRSRGDRSVSASPVRSLCQSQQRTSPRAASRRSISRSPVRSRGHKSAGPSPGRSLSRGRVRTSPRMPSRTSISRSPVRSPGSRSVSRSPVRSPGSKSVSASPVRSRSHRNSPRALSRRSISRSPVRTHNHRSVYRSPVRSRDHRSVSASPIRSLSRNRRKSSPRSSSRRSISTSPVRTYNHKSLSRSPVRSHRRKSVSASPVRSFSRGCQRSSPRAPSRRSISRSPRVSRKSISRSPIRSSARSSGRVPLRSISRSPVRVPSRGNRRSYSRSPRGRSLSKSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRHNGRSDRDRYSGYRRYSPRRNRSPPPRRRTPPRFVFCKCSGVGGAGRLLYHAAHVTEPDIIVEAVVLYTAVHLSMHIDLVLRGAGLCPGAGVLHDPRLQWNQNLHGMRAGTAGQGPQGPSLKAQMGRKGLFLMEMVPPIQAKGGIHL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01567 981 MobiDBLite consensus disorder prediction 681 700 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 833 849 - -
Spst8g01567 981 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 212 IPR002130 GO:0000413|GO:0003755
Spst8g01567 981 MobiDBLite consensus disorder prediction 773 799 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 576 624 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 713 766 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 297 334 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 217 245 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 358 373 - -
Spst8g01567 981 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 213 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 217 866 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 387 410 - -
Spst8g01567 981 SUPERFAMILY Cyclophilin-like 5 215 IPR029000 -
Spst8g01567 981 MobiDBLite consensus disorder prediction 516 551 - -
Spst8g01567 981 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 213 IPR002130 GO:0000413|GO:0003755
Spst8g01567 981 MobiDBLite consensus disorder prediction 436 469 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 801 821 - -
Spst8g01567 981 MobiDBLite consensus disorder prediction 482 499 - -
Spst8g01567 981 Gene3D - 1 214 IPR029000 -
Spst8g01567 981 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Spst8g01567 981 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Spst8g01567 981 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Spst8g01567 981 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01567 Spst-Chr8 17558563 17569564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01567 25 209 U-box Gene Family AT5G67530 33.155 7.75e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01567 K09566 - gmx:100801588 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01567 8 17558563 17569564 Spst8g01567 8 17558563 17569564 ECH