Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01566 ATGAGATCTGTATCTGCTACTGGGATTTTGGCCCAATTGTCAAGATCTTTAGAGTCACCTGCCCCGCATGGTGACCGCAATTGGGATCACATTGAATTTGGGAAACTATATTGTGAAAGCTTGGAAGGGCGAAAGGGTAGTTCTGTTGTGTTACTAGGATTGGTGTTTTGGCGGGTGATGGCAAAGAAGAAGAATTCTTTGGTGTTTATGGATGTTTCTATAGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTATTCTATGATGTTGCTCCAAAGACTGCTGAAAATTTTCGTGCATTATGTACAGGAGAAAGGGGAGTTGGTCCAAATACCGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCGAATTATAAAAGGCTCCATTGCCCAGCCAATTGCGGTTGTTTATTCTGTAGGATACAGGGCTGATGGTCACGACTGCCTTTCTTGTGATATAGTTTTAAGGGTGGTGATTTTGTCTATCGAAATGATGGCCTTGTCACTCAATGAGGGATGGACTGGTGGAGAAAGCATATATGGTTCCAAGTTCCCAGATGAATCACCTTGGCTAAAGCATGATGCTTCAGGCCTTCTTTCCATGCCAGTTGCTGATCGTGATACCCTTGGTTCTAATTTTATCATCACTTTTAAAGCCGATCCCCATCTTGATAGGAAACATGTAGTCTTTGGCAGGCTTGTGCTAGGGCATGATATATTGAAAAAAATTGAAGATGTGGGTGATAAAGAAGGGCTTCCAAGCGTAACTGTTAAAATAATTAATTGTGGTGAACATAATGAGGATGAAAAGAAGATACATAAATCCAAAAAGAGAAGAAATGGATCTTCTGTAACCAATAGTCATGAACTGCATAAGGGAAAGTACAGAAAATCTTCAGGTGACAAAAGGAAAAGGAGAAAGTACTACTTGTCAGACTCTGATAGCTCCTCAGATTCAGACACAAAATCTTCAGAAAGTGATAGTGATTCTGACTCAGACATATCTTCATCATCCTACACAAGTTCCTCCAGCGAAGACAGGAGGAGAAAGAGAAAGAGATCTAGAAAAGATAAACTTAGACGTGGAAAAAGAAGAGACAAACACCGAGAGAAGAGACTAAGGAAACTAGATAAAAGATCTAAGCGTAGATCAAGAAGAAAGTTGGCTGCCGTTGAGATTGTGTTTGGTGTTAGGGAGTCGCCCAGTCATACTGATTCAGATAGTGAAAGTAAGAGCAACAACTGCTCTGATGGTGGAAGTTGTGGTGCTGAAGCAATAGATCAGAAGCATGAAGACCATTCTCAGAGACATGTGAATTTTTGTTGTGGGTCTACTGTCTTGGTTGCATTGTATATTGAGTTATTGCCTGAAGATAAAGACGATCTGGGGTCCAGTACTTGGGGCGAGGAGGGGCCTGCGGAAGGTCAGTCTTCCTCAGTTGTAGAGAAAGAATTACCTCCAATGCACGCAAAAAAGTGGGAGAAACTGGATATGCTAGATGAGGAAGGATTCCCAACGGAAAATGGAGAAAGGTGTAGCAATGGCACTGGAGTCAACTATAGATCTGAAAGACGTGAAGGGAGGCAGCCTGATGTGATGGATGATCAACCAAGCAAATCTAGGAGTCAAAGCATGAGTATTAGTCCCAGGTGCAAGAGCAAAAGCCCAAACATTAGTCCAAAGAAGAGGTTGAGCAGAAGTCCAAGTGGCAGTAGAAGTCCTCGTGCTCCATTACAGAGGAGTTTGACCCAAAGTCCTGTTAGAAGCATTAGCAGGAGTCCAAACAGAAGCATCAGCAGAAGCCCAGTGCGAGGTAGGAAGGGGAGAAGTATCACTAGAAGGCCTGTGAAATCTTGTGGACATCGAAATGTCGGTGCAAGCCCTAAAAGACCCCTTCCTCGGAGCTACCAAAGGACTTCACCTGGAACATCATTATGTAGATCAATAAGCAGAAGCCCAGCGAGATCTCGTGGTCATAGAAGTGTGAGCACGAGCCAAGGAAGATCTCCTTCTTGGAGCCAAAGGAGGAGTTCACACAGAGCTCCATCACGAAGATCAATCAGCACAAGCCCAGCAAGAAATCGTCAACATAGAAGTCTAAGTAGAAGCCCTGGAAGATCCCTTTCTCCTAAGCATCCGATTTCACCCAGAGGACGATCGCGAAGATCAATTAGCCGAAGCCCTGTGAGAACTCGCAATCATAGAAGTGTCAATAAAAGCCCTGTGAGATCTCGTGGTCATAGAAGTGACACTGCAAGCCCTCTTGCTCGAAGTGCCCGCAGGAGTAAGAGTCCTGGGAGAACTGACAATCGTAGAAGTGTTGGCAGAAGCCCTACTAGATCTCATGGTCACAGAAGTAGGAGTGCGAGCCCTGTAAGGTTGCTTTCATGGGACCGCCGAAGGAGTTCACCCAAAGCACCATCAAGAAGATCGATCAGTAGAAGCCCGGTAAGAGTGTCAAGAAAGAGTATAAGTAGGAGTCCAGTTAGATCATCTGCCAGAAGCTTGAGCAGAAGCTCTGGCAGAGTCCCTTTGAGAAGCATTAGCCGAAGTCCAGTTAGAGTGCCAAGCAGAGGCAATCGGCGCAGTTATTCTAGGAGTCCTCGGGGCAGGAGCTTATCTAAAAGTGTGTCACCTGATGTTTCCCCAAAACGTATCCGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGGACTCCCTCTCGATCTCCTGTGAGGTCATACCGCCATAATGGAAGAAGTGACCGGGACAGATATTCAGGTTGTAGAAGGTACTCCCCTAAGCGGAGCAGGAGCCCACTGCCACCTAGAAGAACTCCGCCAAGGTTCCGGAGTAGGAGGAGCAGGACGCTATCTGTATCACGCAGTCCACGTTACCGGCTTCGACGAAGTCGAAGCCGGAGCCATATGGGCAGTCGTTCACCTGTTGGTACATATCGACGTCGTGTTCGGAGGAGCAGGTCTCTGTCCCGGAGCCAGAGTCCATCACTATCCAAGGCGTCAGCGGAATCAGAATCTCCACGAAAAGCGAGCAGGAACAGCAGGTCAAGGTCTCCAAGGTCCCCGTCGGAAAGCCCAGATGGAAAGAAAGGCCTTGTATCTTACGGAGATGCTTCTCCCGATTCAAACTAA 3153 0.4608 MRSVSATGILAQLSRSLESPAPHGDRNWDHIEFGKLYCESLEGRKGSSVVLLGLVFWRVMAKKKNSLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGERGVGPNTGKSLHYKGSFFHRIIKGSIAQPIAVVYSVGYRADGHDCLSCDIVLRVVILSIEMMALSLNEGWTGGESIYGSKFPDESPWLKHDASGLLSMPVADRDTLGSNFIITFKADPHLDRKHVVFGRLVLGHDILKKIEDVGDKEGLPSVTVKIINCGEHNEDEKKIHKSKKRRNGSSVTNSHELHKGKYRKSSGDKRKRRKYYLSDSDSSSDSDTKSSESDSDSDSDISSSSYTSSSSEDRRRKRKRSRKDKLRRGKRRDKHREKRLRKLDKRSKRRSRRKLAAVEIVFGVRESPSHTDSDSESKSNNCSDGGSCGAEAIDQKHEDHSQRHVNFCCGSTVLVALYIELLPEDKDDLGSSTWGEEGPAEGQSSSVVEKELPPMHAKKWEKLDMLDEEGFPTENGERCSNGTGVNYRSERREGRQPDVMDDQPSKSRSQSMSISPRCKSKSPNISPKKRLSRSPSGSRSPRAPLQRSLTQSPVRSISRSPNRSISRSPVRGRKGRSITRRPVKSCGHRNVGASPKRPLPRSYQRTSPGTSLCRSISRSPARSRGHRSVSTSQGRSPSWSQRRSSHRAPSRRSISTSPARNRQHRSLSRSPGRSLSPKHPISPRGRSRRSISRSPVRTRNHRSVNKSPVRSRGHRSDTASPLARSARRSKSPGRTDNRRSVGRSPTRSHGHRSRSASPVRLLSWDRRRSSPKAPSRRSISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRVPSRGNRRSYSRSPRGRSLSKSVSPDVSPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRHNGRSDRDRYSGCRRYSPKRSRSPLPPRRTPPRFRSRRSRTLSVSRSPRYRLRRSRSRSHMGSRSPVGTYRRRVRRSRSLSRSQSPSLSKASAESESPRKASRNSRSRSPRSPSESPDGKKGLVSYGDASPDSN 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01566 1050 MobiDBLite consensus disorder prediction 996 1011 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 947 976 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 350 388 - -
Spst8g01566 1050 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 266 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 604 618 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 538 602 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 635 710 - -
Spst8g01566 1050 SUPERFAMILY Cyclophilin-like 56 271 IPR029000 -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 523 537 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 883 903 - -
Spst8g01566 1050 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 70 265 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 69 266 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 226 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 101 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 199 214 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 227 242 IPR002130 GO:0000413|GO:0003755
Spst8g01566 1050 MobiDBLite consensus disorder prediction 487 509 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 269 421 - -
Spst8g01566 1050 Gene3D - 56 267 IPR029000 -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 284 298 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 810 848 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 464 1050 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 717 744 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 915 931 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 855 881 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 764 778 - -
Spst8g01566 1050 MobiDBLite consensus disorder prediction 307 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01566 Spst-Chr8 17549725 17556675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01566 84 262 U-box Gene Family AT5G67530 32.044 7.45e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01566 K09566 - gmx:100801588 717.613