Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01561 ATGGAGGCCTTTTCTCTGCCGACGCCGCAATCCACCGCGTCAAGCGCCACTCCGGCGCTGCCACAATCCCGGGTGCTCCCCAGTCAGACTCCGCTCCAACGGCGGTTTCAGACGCTACTTGAAGGTGCTAGAGAGAGGTGGATCTATGCAATTTACTGGGAGTCTTCTTACGACCATTCCTCTGCCGCTTCCCTTCTCTGTTGGGGTGACGGCTATTACAACTTCCAGGATATCAACAGAACAGCCCGCAAAACGACGTCGTCCGCAGAACAGACCCAGCGCAAGAACTTTTTGCGTTTACTCTATTCCTTAATTTACGGCTCCTCGGCCTCAGTAGATGACTGCGACGAAGACGTCACTGACCCAGAGTGGTTCTTTCTGATGTCCATGGATCAGACCTTTGTCAACGGCAGCGGCCTGGTGGGCCAGACTTTCTTTAAGTCGAGCCCGGTCTGGATCACCGGGTCAGACCGGTTAACTGAAATGGCCTGCCAACGGGCCCGGCAGTTGCAGGAGTCTGGGTTCCAGACCGTGGTTTGCATACCGTGTCCCAACGGCGTCGTTGAGCTGGCCTCCACTGAAGTGATTCTACCCAATCCTGATCTCATGATCAAAGCGCGAGATTTGATTTACTTCAACTGCTCCGTCGCCTACCTGACTTCTAGCGAAATCATCCAACCACGCAATCTCGAGGTAAAGAAAAGAAAAGTGATTCAAAATGTTCGTGGTTCTTGTTATCGGAAAGTTCTGACGAGGGCTCTGATAGCACATTTTCGCATTCCTACGACTATTCTGGCCCCTCGTGAATTTATCATGTATATTGTTCTCATTAATGATACTGAGCAGTCTGGCTCTTCATCCTCCTCATCTCTAGCTAATCAGTGGATAATTGCTTGTTCATCCCGATTCTCATGTGGCCGTATTCGCCAGTTACCTGGCGGCTGTCTTCGTTTGTGTGGTTCCAAGTGA 969 0.5139 MEAFSLPTPQSTASSATPALPQSRVLPSQTPLQRRFQTLLEGARERWIYAIYWESSYDHSSAASLLCWGDGYYNFQDINRTARKTTSSAEQTQRKNFLRLLYSLIYGSSASVDDCDEDVTDPEWFFLMSMDQTFVNGSGLVGQTFFKSSPVWITGSDRLTEMACQRARQLQESGFQTVVCIPCPNGVVELASTEVILPNPDLMIKARDLIYFNCSVAYLTSSEIIQPRNLEVKKRKVIQNVRGSCYRKVLTRALIAHFRIPTTILAPREFIMYIVLINDTEQSGSSSSSSLANQWIIACSSRFSCGRIRQLPGGCLRLCGSK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01561 322 PANTHER MYC 19 236 IPR045084 GO:0003700|GO:0006355
Spst8g01561 322 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 32 208 IPR025610 -
Spst8g01561 322 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01561 Spst-Chr8 17449736 17452610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01561 28 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 47.000 4.95e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01561 K13422 - gmx:100790854 265.003