Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01556 ATGGATTCTGAAATACTCAACACACTTGCTCTTATCTTTTCCTTTCTCCTCTCCATGATTGTGGCACTGAAACTAGGGAGAAACCTGAAGAAAACTGAGTCATCTCTTAGCATACCCCCAGGGCCATGGAAGTTGCCTATTATAGGAAACTTACACCATCTTGTTTCATCCACACCACACAGAAAATTAAGAGACTTAGCCAAAATATATGGACCCTTGATGCATCTCCAACTAGGAGAAATCTTCACAGTCGTTGTTTCCTCACCAGAGTATGCTAAAGAGATCATGAAAACACATGATGCAATCTTTGCATCAAGGCCTCAACTTCTAGCAGCAGATATAGCCTCCTATGGATACACAAATATTGCTTTTGCACCCTATGGAAGTTATTGGAAAAAGGTAAGAAAAATCTGCACCATGGAACTTTTCTCCCCAAAACGTGTGAACTCATTCCAGCCTATCAGAGAAGAAGAACTCACCAATCTTGTTAAAATGGTTGGTTCACATGAAGGGTCCCCCATAAACCTCACTCAAGCAGTGCTCTCAACTATGTATAACATAATTTCAAGAGTTGCTTTGGGCAAGAAGCGCAGCAAATACCATGATGAATTCATGACAGTACTCAAAGAAGGAGTGTTAGCTGCAGGAGGTTTTAACATAGGAGAGTTGTTTCCTTCTGCTAAATGGCTTCAACTTCTTACTGGTGTGAGGCCTGTGCTGGAGAAGGTGCATGCACAAATTGATCGCATACTAGAAGAAATCATCAATGAACACAAAGAAGCAAAGTCCAAAGCCAAAGAAGACCATGAATCAGAGGAAGATTTGGTAGATGTTCTTTTAAAGTTCCATGATGGCAATGAAAGTAACCAAGACATTTGCTTAACTAGGAACAACGTCAAGGCAGTAACCATGGACATATTTGCAGCAGGAGTTGATCCTTTAGCAACGACCATAAATTGGGCAATGGCGGAGATGATAAAGAATCCAAGAGTGATGAAGAAAGCTCAAGATGAGGTGAGAGAGGTATTCAATGTGAAAGGAAGGGTTGAGGAGAGTTGCCTGAATGAACTAAAGTATTTGAAATCAGTTGTGAAAGAAACCCTAAGATTGCACCCACCAGCTGCTCTTGCGCTTCCAAGAGAATGTGCACAGACATGTGAGATTGATGGGTTTCACATACCAGTCAAAACCAAGGTGGTGATCAATGTTTGGGCTCTTGGAAGAGATCCAAAGTACTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCGCTATTGATCATAAAGGGAATCACTTTGAGTACATTCCCTTTGGTGCTGGAAGAAGAATATGTCCAGGCATCACCTTTGGTTTGGTAAATGTTGAACTCACACTTGCATTTTTGTTGTTTCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTGAGGACTTCGACATGACTGAGGAATTTGGAGTGACTGTTGCAAGAAAGGTTGACATACACGTGATACCTGGAAATGGCAGTGCAGACTATAGTATTGGGTGCCAATGA 1545 0.4136 MDSEILNTLALIFSFLLSMIVALKLGRNLKKTESSLSIPPGPWKLPIIGNLHHLVSSTPHRKLRDLAKIYGPLMHLQLGEIFTVVVSSPEYAKEIMKTHDAIFASRPQLLAADIASYGYTNIAFAPYGSYWKKVRKICTMELFSPKRVNSFQPIREEELTNLVKMVGSHEGSPINLTQAVLSTMYNIISRVALGKKRSKYHDEFMTVLKEGVLAAGGFNIGELFPSAKWLQLLTGVRPVLEKVHAQIDRILEEIINEHKEAKSKAKEDHESEEDLVDVLLKFHDGNESNQDICLTRNNVKAVTMDIFAAGVDPLATTINWAMAEMIKNPRVMKKAQDEVREVFNVKGRVEESCLNELKYLKSVVKETLRLHPPAALALPRECAQTCEIDGFHIPVKTKVVINVWALGRDPKYWSEAERFYPERFIDSAIDHKGNHFEYIPFGAGRRICPGITFGLVNVELTLAFLLFHFDWKLPNGMKSEDFDMTEEFGVTVARKVDIHVIPGNGSADYSIGCQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01556 514 FunFam Cytochrome P450 71D8 31 502 - -
Spst8g01556 514 CDD CYP71-like 70 497 - -
Spst8g01556 514 Pfam Cytochrome P450 39 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 Coils Coil 255 275 - -
Spst8g01556 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Spst8g01556 514 Gene3D Cytochrome P450 31 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PANTHER CYTOCHROME P450 71B11-RELATED 21 502 - -
Spst8g01556 514 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g01556 514 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01556 Spst-Chr8 17245959 17252539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01556 7 502 Cytochrome P450 AT3G26300 42.574 7.59e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01556 - - gmx:100818508 781.171