Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01541 ATGCGTGTCAGATTGAAAAGTCCACGTGTCACTATCACAGCGGTTCTCCGATATTCTATCGCAGAGTCAAGAATGTCTAAAGAAGTTATTGCTACGCCTTCAGCTTCTCCTTTTGAGTTTGAGCTCTTGGATAGTGATTTTGACATTGTTCGATCTGTTGGTGCCTCATCCAATCGTGCAAATCCATGGATTGAACCAGAAAGGTTGAAGCTTAGACACAGAATTGGTCGAGGTCTCTTTGGTGATGTTTGGTTAGCAACTCATCATCACTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTACATACAATCAGAGAGGATCATATGAAGATCGTAATAGAAAAGTTTGATGAATTATATTTTAAGTGCCAAGGAGTTGCTAGCATGTCCTGGCTGCATGGAATTTCAATCTTAAACGGAAGGATATGCATCGTTATGAATTTATATGAGGGTTCAATTGGTGACAAGATGGCGGGACTCAGAGAAGGAAGGATTTCATTGCGTGATGTTTTAAGGTATGGAATCAATCTGGCACAAGGTGTTCTAGAACTTCACTCTCTAGGAATCCTCATTCTTAACATTAAACCATTCAATGTTATTCTCAATGAAAACGATCAAGCAATTTTGGGAGATGTTGGAATTCCTAGTCTTTTGCTTGACTCGTCATTCCTAAGCACAGATATAGATAAGAGGCTTGGAACACCAAATTACATGGCTCCAGAGCAATGGGAACCAAAGATCAGAGGTCCTATATCGTTTGAAACAGATTCTTGGGGATTTGGTTGCACAATTGTCGAAATGTTGACTGGTAATAAACCTTGGTATGAATGTCCTGTTGGCAGAATATACCAGTCAGTTGTTGAAAAGCATGAAAAACCCAATATTCCTAGTGGCCTTCCTTCTTCAGTTGAGAATCTCCTCAGTGCATGCTTTGAGTATGATTTTAGAAATCGCCCTTTAATGATAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAGCTGGCCAATGATGGGGAATGGAGATATCTAGGAAATGTGAAAGTCAATCCAAAATCAGGTAGCTCTGGATACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGTGACATGGTTCGAACCAGAAAGCTTCCCAATTCAAGCAGACTTCAAAACATGGACATCCCAGGAGGAACTGTTGTTAGTTTAGACTGTAACACAGATCACAGGTTCGCACTTGTGAGGGTCCATGGAAATGACGACCCTATTAGAATTCATGTATCATCCCTTGAACGTGTCACATATGGCTTGGTAGCTGGTGATTGGGTACACTTGAGGGATGAAAACGAGAAGCACTCACCTGTGGGCATTCTACACTCCATCAATCGTGATGGTAGAGTATCTGTTGGATTTATTGGGCTGCAAACTCTCTGGGAGGGAAACTCTTCTGAACTAGAAAAGGTGAAAACTTACTTTGTTGGCCAGTTTGTCAGGCACAAAAACAACGTTTCAAGTCCTCGATTTGAGTGGCGTCGCAAAAGGGGAGGTGCCTGGGCTGCTGGTAGGATCTCATGGATTCTTCCAAATGGAGGTTTGGTTGTCAAGTTCCCAGGGATGCTTCCTTTTGGCAATGAACCAAACACCTACTTAGCTGATCCCTCTGAGGTTGAAGTGGTTGAGTTCAGGACTTGTCCCGGGATCATAGAAAAGTATCAACATGTAGAGGATCATCACTGGGCAGTTAGACCAGTTCTAATTGCATTTGGTATATTCACTGCTTTCAAATTTGGCATACTAGTAGGAAAGAAAGTGAGGAGGAACAACAAGGTCAATGCAGTAGAAATTGAAAGTCAATATCTTGCTGGTCAAAATCAAAATCCCACCTCTGCTTCAACTACTACTACTACCACAATGAGATCTTCCAGTGCTACAAAACAAGGCACACAACATGGATTCCTGCAGTTGCTGTCATGA 1974 0.4184 MRVRLKSPRVTITAVLRYSIAESRMSKEVIATPSASPFEFELLDSDFDIVRSVGASSNRANPWIEPERLKLRHRIGRGLFGDVWLATHHHSTEDYDEYHEVAAKMLHTIREDHMKIVIEKFDELYFKCQGVASMSWLHGISILNGRICIVMNLYEGSIGDKMAGLREGRISLRDVLRYGINLAQGVLELHSLGILILNIKPFNVILNENDQAILGDVGIPSLLLDSSFLSTDIDKRLGTPNYMAPEQWEPKIRGPISFETDSWGFGCTIVEMLTGNKPWYECPVGRIYQSVVEKHEKPNIPSGLPSSVENLLSACFEYDFRNRPLMIDILSVFQSALNELANDGEWRYLGNVKVNPKSGSSGYTEWFLSKDHLQVGDMVRTRKLPNSSRLQNMDIPGGTVVSLDCNTDHRFALVRVHGNDDPIRIHVSSLERVTYGLVAGDWVHLRDENEKHSPVGILHSINRDGRVSVGFIGLQTLWEGNSSELEKVKTYFVGQFVRHKNNVSSPRFEWRRKRGGAWAAGRISWILPNGGLVVKFPGMLPFGNEPNTYLADPSEVEVVEFRTCPGIIEKYQHVEDHHWAVRPVLIAFGIFTAFKFGILVGKKVRRNNKVNAVEIESQYLAGQNQNPTSASTTTTTTMRSSSATKQGTQHGFLQLLS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01541 657 PANTHER OS06G0639500 PROTEIN 25 627 - -
Spst8g01541 657 Gene3D Phosphorylase Kinase; domain 1 48 125 - -
Spst8g01541 657 MobiDBLite consensus disorder prediction 623 650 - -
Spst8g01541 657 Pfam Protein tyrosine and serine/threonine kinase 69 331 IPR001245 GO:0004672|GO:0006468
Spst8g01541 657 Gene3D Transferase(Phosphotransferase) domain 1 156 354 - -
Spst8g01541 657 ProSitePatterns Protein kinases ATP-binding region signature. 75 104 IPR017441 GO:0005524
Spst8g01541 657 ProSiteProfiles Protein kinase domain profile. 69 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01541 657 SUPERFAMILY Protein kinase-like (PK-like) 66 333 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01541 Spst-Chr8 16675043 16681435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01541 64 340 MAP Kinase Kinase Kinase AT2G17700 24.643 6.90e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Spst8g01541 PK_Tyr_Ser-Thr 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01541 - - gsj:114393396 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01541 8 16675043 16681435 Spst8g01541 8 16675043 16681435 ECH
Spst9g00773 9 6649013 6651976 Spst8g01541 8 16675043 16681435 ECH
Spst8g01541 8 16675043 16681435 Spst9g00773 9 6649013 6651976 PCT