Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01540 ATGTTTGTCTTAGAAAATGGTGCGAAGAAGGGGGAAGAACAAAGGCTTCAAGCCATCTCCCAAGCCATCAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGATATAACAACATTGTTGTTGGATCACAAAGCGTTTAAAGACGCGGTGGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCCAAGTTTGTTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATATCAGAAAAATATGTTCTAGAATATGGCAGTGATTGCTTGGAGATGCATGTTGGGGCTGTTCAGGCCAGTGAACGGGTCATAATTATTGATGATTTGGTGGCTACAGGTGGAACTCTGTCAGCAGCAACTAGACTTCTAGAACGTGCTGGTGCAGAAGTGGTGGAGTGCGGTTGTGTGATTGGTGTGTCAGATCCCAAGGTAGGGTGCAACAAGGTGAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGTGAAGTAGAAAATGATTTTTGA 585 0.4393 MFVLENGAKKGEEQRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDAVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFVPLCKPGKLPGEVISEKYVLEYGSDCLEMHVGAVQASERVIIIDDLVATGGTLSAATRLLERAGAEVVECGCVIGVSDPKVGCNKVNGKPLYILLEPREVENDF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01540 194 CDD PRTases_typeI 52 186 IPR000836 -
Spst8g01540 194 SUPERFAMILY PRTase-like 22 169 IPR029057 -
Spst8g01540 194 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 187 - -
Spst8g01540 194 Gene3D - 6 186 IPR029057 -
Spst8g01540 194 FunFam Adenine phosphoribosyltransferase 1 7 187 - -
Spst8g01540 194 Hamap Adenine phosphoribosyltransferase [apt]. 19 187 IPR005764 GO:0003999|GO:0005737|GO:0006168
Spst8g01540 194 NCBIfam adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Spst8g01540 194 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01540 Spst-Chr8 16670067 16672903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01540 1 150 PRT Gene Family AT5G11160 78.667 5.58e-79 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01540 K00759 - gmx:100775389 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01540 8 16670067 16672903 Spst8g01540 8 16670067 16672903 ECH
Spst9g00772 9 6630897 6634654 Spst8g01540 8 16670067 16672903 ECH
Spst8g01540 8 16670067 16672903 Spst9g00772 9 6630897 6634654 PCT