Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01525 ATGACGCCTATAAGATACTCATACAAGGAAATTAAGAAGATGGCTAACGGATTCAAAGACAAGTTGGGTGAAGGAGGATATGGCTCTGTGTTTAAGGGAAAACTCTCTAGTGGACCGTATGTGGCAATAAAAATGTTAGGAAAATCAAAAGGAAATGGACAAGACTTTATCAGTGAAGTAGCAACCATTGGAAGAATACATCATCAAAATGTGGTGCAATTAATTGGATTTTGTGTTAGTGGCTCAAACCGTGCTCTTGTGTATGAATTCATGTCCAACGGATCTCTTGACAAATTTATTTTTTTCAAAGAGGGAAGTGTAGATTTAAGCTATGACAAAATATACAATATATCAGTGGGAGTGGCTCGTGGGATTGCTTATCTCCATCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAACCCCATAACATCTTACTCGATAAAAACTTCATTCCAAAGATCTCAGACTTTGGATTGGCAAAGTTATATCCAATTGATAATAGCATTGTAACAATGACAGTAGCAAGAGGGACAATTGGATATATGGCTCCAGAACTATTCTACAAAAATATTGGAGGAATATCACATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTAATGGAGATGGCAAGCAAGAGGAAAAATCTGAATCCCCATGTAGAACGGTCAAGCCAACTTTACTTTCCCTTTTGGATTTATAATCATATCAGAGAAGATGAAGATATAGAAATAGATGATTTGACAGAAGAGGAAAAGAAAATAGCAAAGAAAATGATTATAGTGGCACTTTGGTGTATACAATTGAAACCAAATGACCGTCCCTCCATGAATAAGGTAGTGGAAATGTTAGAAGGTGATATTGAAAGCTTAGAAATACCTCCAGAGCCCACTCTATATCCTGATGAAATGAATACAGAGGATCAAACAATCAGCACAATGTCCAGTAGCTTTGAAACGTTCTCGTGA 975 0.3651 MTPIRYSYKEIKKMANGFKDKLGEGGYGSVFKGKLSSGPYVAIKMLGKSKGNGQDFISEVATIGRIHHQNVVQLIGFCVSGSNRALVYEFMSNGSLDKFIFFKEGSVDLSYDKIYNISVGVARGIAYLHHGCEMQILHFDIKPHNILLDKNFIPKISDFGLAKLYPIDNSIVTMTVARGTIGYMAPELFYKNIGGISHKADVYSFGMLLMEMASKRKNLNPHVERSSQLYFPFWIYNHIREDEDIEIDDLTEEEKKIAKKMIIVALWCIQLKPNDRPSMNKVVEMLEGDIESLEIPPEPTLYPDEMNTEDQTISTMSSSFETFS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01525 324 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 307 IPR045874 GO:0004672
Spst8g01525 324 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Spst8g01525 324 MobiDBLite consensus disorder prediction 305 324 - -
Spst8g01525 324 FunFam PR5-like receptor kinase 91 298 - -
Spst8g01525 324 SMART serkin_6 16 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01525 324 Pfam Protein kinase domain 19 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01525 324 FunFam serine/threonine-protein kinase PBS1-like 1 90 - -
Spst8g01525 324 CDD STKc_IRAK 22 288 - -
Spst8g01525 324 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Spst8g01525 324 Gene3D Transferase(Phosphotransferase) domain 1 91 299 - -
Spst8g01525 324 ProSitePatterns Protein kinases ATP-binding region signature. 22 44 IPR017441 GO:0005524
Spst8g01525 324 PIRSF ILK 6 294 - -
Spst8g01525 324 MobiDBLite consensus disorder prediction 294 324 - -
Spst8g01525 324 ProSiteProfiles Protein kinase domain profile. 16 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01525 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01525 Spst-Chr8 16305347 16306321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01525 5 312 Receptor kinase-like Gene Family AT5G38280 50.157 2.21e-111 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01525 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01525 - - gmx:121173411 544.273