Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01521 ATGAAAACTTCATTCCAAAGATCTCAGACTTTGGATTGGCAAACGTTATATCCAATTGATAATAGCATTGTGACAATGACAGCAGCAAGGGGAACCATTGGATATATGGCTCCAGAATTGTTTTACAAAAATATTGGAGGAATATCTCATAAGGCTGATGATGTATACAGCTTTGGAATGCTTTTGATGGAGATGGCGATAGTGGAAATGCTTGAAGGCGACATTGAAGATTTGGAAATACCTCCAAAGCCCACTATCCGGATGATACAGTTAGAGAAGATCAAACAATCAATACAATATTCAGTAGCTTTGACACGTTCTCCTAATTATTCCATGTAA 339 0.3717 MKTSFQRSQTLDWQTLYPIDNSIVTMTAARGTIGYMAPELFYKNIGGISHKADDVYSFGMLLMEMAIVEMLEGDIEDLEIPPKPTIRMIQLEKIKQSIQYSVALTRSPNYSM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01521 112 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01521 112 SUPERFAMILY Protein kinase-like (PK-like) 17 78 IPR011009 -
Spst8g01521 112 Gene3D Transferase(Phosphotransferase) domain 1 5 110 - -
Spst8g01521 112 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 66 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01521 Spst-Chr8 16184630 16185158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01521 22 65 Receptor kinase-like Gene Family AT4G18250 63.636 2.40e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01521 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01521 - - gmx:100305367 98.9821