Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01510 ATGAAAACGAAGCTTCTTCTTTTGTTTCTCATGCTCCTCCTTATTCTCCACAAACCCATTTGGACTCTTGCCTCACCATACCCTCTTGCCCCCTCACCTCAAGTTCCACCCTTTTCTCCAATTTCAACTTCAATGTCTGCTTCTTCTCCAGGAATTGTGATGGGGGCTGAACAGCAGCAAATGGATTCGCACAAGAAAATGGTAATTGCAATTGCCGTAGCCAGCACTTCACTTGGTGCAGTCATTTTGAGTGTGTTGTGTATCTGGATTTACCATACCAAGTACCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAGAAAGGGTTAGCTTCATCACCAACTTTGAGTAAATTCACCTCTATAAAGCTGGTTGGTAAGAAAGGGGGTGTTCCAATCATTGATTATAAGCAAGTAGAAAAAGCCACTGGCAATTACAAGGAAAGTAACATCTTGGGTGAGGGAGGTTTTGGATGCGTTTATAAAGCTCATTTAGATGATAATTTGGAAGTTGCCGTTAAGAAACTGCACTGTGAAAATCAGTATGCTGAGCAAGAATTTGAGAACGAGGTGGAATTGTTAAGTAAAATTCAACATCCAAATGTGATTTCTCTGCTGGGTTGTAGCAGTAATGAAGATACAAGGATTATTGTCTATGAATTGATGCATAATGGATCATTAGAAACTCAATTACATGGACCTTCTCATGGCGCTGCATTGGCTTGGCATTTGAGGATGAAAATTGCCCTTGACACAGCAAGGGGATTAAAATATCTGCATGAGCACTGTTATCCTCCTGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGACACGAAGTTCAATGCCAAGCTTTCAGATTTTGGTCTTGCCATAACCAATGGGACCCAAAACAAGAACAATATCAAGCTTTCAGGCACGTTGGGTTACGTGGCCCCGGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTGCTGGAGCTTCTATTGGGAAAGAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCTAAGCTTCCAAACATCGTGGATCCTGTAATTAAGGATACAATGGACCCCAAACACTTATACCAGGTTGCTGCAGTGGCAGTGCTGTGCGTGCAACCAGAGCCAAGTTACCGTCCCCTGATTGCAGATGTTCTCCACTCACTCATCCCTCTTGTGCCCGTTGAGCTTGGAGGAACACTCAAAGTTGCACAACTGCCACAGCAAGTCTTACCTGCTGACCCACATGAGGATTCTAGACCATGA 1356 0.4277 MKTKLLLLFLMLLLILHKPIWTLASPYPLAPSPQVPPFSPISTSMSASSPGIVMGAEQQQMDSHKKMVIAIAVASTSLGAVILSVLCIWIYHTKYPSKSKGKNVQRSDAEKGLASSPTLSKFTSIKLVGKKGGVPIIDYKQVEKATGNYKESNILGEGGFGCVYKAHLDDNLEVAVKKLHCENQYAEQEFENEVELLSKIQHPNVISLLGCSSNEDTRIIVYELMHNGSLETQLHGPSHGAALAWHLRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDTKFNAKLSDFGLAITNGTQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPADPHEDSRP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01510 451 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Spst8g01510 451 ProSiteProfiles Protein kinase domain profile. 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01510 451 SUPERFAMILY Protein kinase-like (PK-like) 132 419 IPR011009 -
Spst8g01510 451 FunFam probable receptor-like protein kinase At1g80640 225 424 - -
Spst8g01510 451 SMART serkin_6 149 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01510 451 FunFam Protein kinase superfamily protein 116 224 - -
Spst8g01510 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Spst8g01510 451 Pfam Protein kinase domain 149 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01510 451 PANTHER OS01G0750732 PROTEIN 35 422 - -
Spst8g01510 451 Gene3D Phosphorylase Kinase; domain 1 111 224 - -
Spst8g01510 451 CDD STKc_IRAK 155 422 - -
Spst8g01510 451 Gene3D Transferase(Phosphotransferase) domain 1 225 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01510 Spst-Chr8 15966784 15971145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01510 27 365 Receptor kinase-like Gene Family AT1G80640 49.415 6.95e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Spst8g01510 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01510 - - vra:106764755 820.461