Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01499 ATGGCTGCATCTCAAGCTAATGATCCTAGAAGCACAGTTTCTATTTCAAGGATTGTGTCTGTGAATCCCAAACTTGTGCAACCTCAGGGGGTTTTGACCCTTTCAAATTTGGACAGGCAGTGTCCACACCTCATGCACTTGGTGTTCTTCTACAACAACCTGCCTCACCAAAGGTTGAAGGAATTGTCCCTCAATTCAGTGTTCTCCAACTTGAAATCTGGCTTGGAAGATACCTTGGCTCTATGGTATCCTGGTGCAGGTAGGCTTTGGCCGAATCAAAGTGATGGCAAACTCAATCTCTGGTGCAACAACCATGGTGCAGTTCTGGCAGAGGCCGAAACCTCTGTCAAAATCTCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGCTTTTGATGGGAACCTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCATTATTTGACGGGCCAGCAACCTATGACTTCTTGTATGCATGGGCTTCAAATTCTGAAATTGTGAAAGGAAGAAGCAAATCTGATGAACTTCCAAAGCCAGTGCATGAGAGAGGGATACTTCTGAGTGGTACTCTTCGAGGCCCAAGAGGGACAACAAATTTTCCTTCAGACTCAAGTTCAAATGCTAAGAAAGCAAGGGCCATGGCAATAGATCACTTATATCAACTAATAATGCAAACAGCTTGTGCACAAAAGGGTTCTCTGCAAATCGGAGCACCTTCGAATCCAAATAAGTGTGTTCTGAAAACCTATCATCTTTCAGGTGCAATGATAGAAACCTTGAAAAGGAAACACTTCCCCATGCAGAGAGGTTCACTTCCTTTCTCAACCTTTGAAGTTCTTGCTGCTCATCTTTGGAAGAAGTATAAGGCAAGGAGCAAAGGTTTAGCGGTGGAAAAGGAGAAGCTAGTATGCCTCCAATTCGCGGTGGACACAAGGAACAAGATGACACCCCCATTGCCAAAATCTTTCAGTGGAAACGCATATGTTCTGGCCTCCATCATGATGGCAATGGGAGAATTGGAACATGCAAGCCTTCAGTGCATCATTGAGAAAATAAGAGAGGTCAAGAACAAGGTGAACCATGAATATGTGAGAGCCTACGTTGAGGCACTAGAAGGACCCCAACAAGGTTCATCTCTCCCTCCACTTAAGGAGCTAACCTTGGTTTCTGATTGGACAAGGATGCCCTTTCACAACATTGAGTTCTTTCATGGCAAAGCAACCTATGCATCCCCTCTTGCCACTCCTATTCCACAGGTCGCGTACTTCATGCAAAGCCCTAGTGACAACATGGGCGTTGATGTCAGAATTGGCTTGGAAGCCGAACACATAATTGCTTTTACTGAAAGCTTTTTAAGCATAGCGTGA 1443 0.4435 MAASQANDPRSTVSISRIVSVNPKLVQPQGVLTLSNLDRQCPHLMHLVFFYNNLPHQRLKELSLNSVFSNLKSGLEDTLALWYPGAGRLWPNQSDGKLNLWCNNHGAVLAEAETSVKISQLGNLSEYNEFFEKLVYKPAFDGNLSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIVKGRSKSDELPKPVHERGILLSGTLRGPRGTTNFPSDSSSNAKKARAMAIDHLYQLIMQTACAQKGSLQIGAPSNPNKCVLKTYHLSGAMIETLKRKHFPMQRGSLPFSTFEVLAAHLWKKYKARSKGLAVEKEKLVCLQFAVDTRNKMTPPLPKSFSGNAYVLASIMMAMGELEHASLQCIIEKIREVKNKVNHEYVRAYVEALEGPQQGSSLPPLKELTLVSDWTRMPFHNIEFFHGKATYASPLATPIPQVAYFMQSPSDNMGVDVRIGLEAEHIIAFTESFLSIA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01499 480 Gene3D - 253 477 IPR023213 -
Spst8g01499 480 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 444 - -
Spst8g01499 480 Pfam Transferase family 17 476 - -
Spst8g01499 480 Gene3D - 9 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01499 Spst-Chr8 15615344 15622419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01499 13 477 Monolignol Biosynthesis Gene Families AT5G48930 24.211 1.39e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01499 K15400 - gmx:100803347 801.586