Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01491 ATGGCAAACTACCACCGCAACAACGTCGAGCATGTGGTCCTCGGCCACCACCACCATCAACACCACCGTTCCAAGGCCACCTCCGTCGCCGGCGGCCATTTCCGCCTATGGCAGTCCCTCTCCGTCACCTCCTTACGCCGCCTGATATTCGACGCCGTCAGCTGCGGCGCCAGTTCCCGCTACGCTGAGAGATCCGACACGTCCTCCGAGAGACACCAGCACCAACAGAAACAGCAACAGCTGCACAAGACGAAGCCGAATAGCGCGAAGTCGGAGAAGCTCTCGGATCTGCTGAACCTCGCGGAGGTCGAAGCCGACGCGGAAACGAAGAAGAAAGAAGAGAAGCTCGAGGAGCTGAAGAGCATTGTGAAGGAGCTTCAGAAGGAAGAAGAAGGAAAAGAGGAAGAAGAAGAAGAATCAATGAAACGAAGAAGAGAAGCTGCTTCGAAGGTGAGGTTGCTAGCCAAAGAGGATTTGGAAGTTAGAGGAACGCTCGCGATGCTCGGAGCCATTCCTCCTCTCGTCGCAATGCTCGATGAAACTGAAAACGACGTCGATTCGCTCGTGGCTTCGCTCTACGCGCTGCTCAACCTCGGAATCGGAAACGACGCGAATAAAGCAGCTATTGTGAAAGTTGGGTCTGTTGAGAAGATGCTGAAGCTGATTGCATCTCCAGATGGTCTAGATTCTTCGGTTTCTGAAGCAATTGTTGCGAATTTCCTTGGACTTAGTGCTTTGGATTCGAATAAGCTCATAATTGGGTCTTCGGCTTCAATTTCTTTCTTAGTTAGAACCCTGCAGAGTTTAGATGACAAGAGTAGTCCTCAAGCCAAGCAAGATGCTCTACGGGCATTGTACAATCTTTCGATCTACCCAGCCAATGTTGCATTCGTTTTGGAAACAGATTTGGTTCTGTTTCTGGTGAGCTCAATAGGGGACATGGAGGTAACTGAAAGAGCCCTTGCAATTCTCAGTAACTTGGTGTCGACCCGGGAGGGTAGAAAGGCGATTAGTGCAGTGCAAGATTCGATTCCTATCCTGGTGGATGTGTTGAATTGGACAGATTCGCCAGAATGCCAGGAGAAGGCATCGTACATTTTGATGGTTATGGCACACAAGTCCTACGGGGACAAGCAGGCCATGATTGAGGCAGGGATTGCGTCATCGCTGCTTGAGTTGTCCCTTTTGGGTACCACATTGGCTCAGAAAAGGGCATCAAGGATACTGGAAATTTTGAGGGTGGACAAAGGGAAACAGGTTTCTGGGAGCTATGGCTTGAGTGCTGCTGTCTCTGCCCCTATTTGCGGCTCTTCGTCGGCGAAGCCGGGTGACGGAGGGAGAGATTGTTTTGACGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAGCAACATGAGGAAAATTGTAAAAAGGGCCAATTTGCCTCACGACATTGTGCCATCGGATCATTTCAAGTCACTCACTTCAAGTTCTACCTCAAAGAGCCTACCATTTTGA 1530 0.502 MANYHRNNVEHVVLGHHHHQHHRSKATSVAGGHFRLWQSLSVTSLRRLIFDAVSCGASSRYAERSDTSSERHQHQQKQQQLHKTKPNSAKSEKLSDLLNLAEVEADAETKKKEEKLEELKSIVKELQKEEEGKEEEEEESMKRRREAASKVRLLAKEDLEVRGTLAMLGAIPPLVAMLDETENDVDSLVASLYALLNLGIGNDANKAAIVKVGSVEKMLKLIASPDGLDSSVSEAIVANFLGLSALDSNKLIIGSSASISFLVRTLQSLDDKSSPQAKQDALRALYNLSIYPANVAFVLETDLVLFLVSSIGDMEVTERALAILSNLVSTREGRKAISAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYGDKQAMIEAGIASSLLELSLLGTTLAQKRASRILEILRVDKGKQVSGSYGLSAAVSAPICGSSSAKPGDGGRDCFDEEEDMMSEEKKAVKQLVQQSLQSNMRKIVKRANLPHDIVPSDHFKSLTSSSTSKSLPF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01491 509 Gene3D - 269 424 IPR011989 -
Spst8g01491 509 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 509 - -
Spst8g01491 509 SUPERFAMILY ARM repeat 120 412 IPR016024 -
Spst8g01491 509 Coils Coil 98 146 - -
Spst8g01491 509 Coils Coil 450 470 - -
Spst8g01491 509 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 169 213 IPR000225 GO:0005515
Spst8g01491 509 MobiDBLite consensus disorder prediction 127 147 - -
Spst8g01491 509 SMART arm_5 202 245 IPR000225 GO:0005515
Spst8g01491 509 SMART arm_5 291 329 IPR000225 GO:0005515
Spst8g01491 509 SMART arm_5 333 372 IPR000225 GO:0005515
Spst8g01491 509 SMART arm_5 158 200 IPR000225 GO:0005515
Spst8g01491 509 SMART arm_5 246 290 IPR000225 GO:0005515
Spst8g01491 509 Gene3D - 135 268 IPR011989 -
Spst8g01491 509 MobiDBLite consensus disorder prediction 60 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01491 Spst-Chr8 15103268 15105522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01491 137 416 U-box Gene Family AT1G67530 31.228 1.33e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01491 - - gmx:100788575 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01491 8 15103268 15105522 Spst9g00721 9 6162282 6163863 PCT