Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01484 ATGGATGTATCCAGGTTTAAGTTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTTCACTGAGACGGTTGCAGGTTCCAATGATTGTGATGATAATGGCAATTTGGGGGATGAAGCTGGTATTGCTATTATCCCACCAAAACAGGATAGAGAAGAAAAGACTCCCATGTTAGATATGATATCCCAAAATAGAAGAAGCACTTTGGTTGCTAGTGATGAAGTATTACCTGATGAAATTCAGGAGGAGGATTCGTTGTCGTTGGAAGGTGACCAGATTGTGGATAGCTCGTGTTCTCTTTCAGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTTTAGATGCTACATCAGATGTTGGGACACCTTGTTCTGCTGACGTAGATAAGAGCGTTTGTGCTGTAAATATTGTTGCTGAGGGGATTGACTTGGAGGAATCAAATGTTAACACAGATATGACTGAACCTCTTGCTGAGGCAGTGAGCCTTGACGGAGAGAATGCAATTAGATCTGGCCCTAAGCCTTCCGATGTTGTTCTTCATCATTTGCCTCAGGAAAAGGGGGTGAGTGGAATGGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTGTGTGTGGAAGAAGACCTGAGATGGAAGATGCACTTGCAACTGTTCCTCGATTTTTAAAAATTCCTATTCAAATGTTAATTGGTGATCGGGTGCTTGATGGAATAAACAAGTGTTTTAGTCAACAGATGACTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAAGTATTGTCAAGATCGTATCCATAAGGCTTTGGCTGAGGAAATAGAATTTGTTAAGGAAGCTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGTTTTCACCAATTGCTTCTTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTAATAATGAACCTGTTGCCCCCGAAACTGTTGGCTCCACCGCTGTTGTTGCTGTTATTTGCTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCGGTTCTATGTCGTGGCAAAGAACCCATGGCACTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGTGACAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCCCGTACAAAAGACGATGAGTGTCTCATTCTCGCCAGTGATGGTCTCTGGGATGTTATGACGAATGAAGAGGTGTGTGACCTTGCTCGGCGACGGATACTTCTCTGGTACAAGAAAAATGGCTTTGAACAACCCTCATCAGAAAGGGGAGAGGGAACTGATCCTGCTGCACAAGCAGCAGCAGAATACCTATCAAACCGTGCCCTTCAGAAAGGAAGCAAAGATAACATCACTGTGACTGTGATTGATTTGAAACCCCAAAGGAAATATAAGAGCAAGTCATGA 1581 0.425 MDVSRFKLMADTGLLSNSVTKVFTETVAGSNDCDDNGNLGDEAGIAIIPPKQDREEKTPMLDMISQNRRSTLVASDEVLPDEIQEEDSLSLEGDQIVDSSCSLSAVSENSSVCGEESFCLDATSDVGTPCSADVDKSVCAVNIVAEGIDLEESNVNTDMTEPLAEAVSLDGENAIRSGPKPSDVVLHHLPQEKGVSGMVGRSVFELDYTPLYGFISVCGRRPEMEDALATVPRFLKIPIQMLIGDRVLDGINKCFSQQMTHFFGVYDGHGGSQVAKYCQDRIHKALAEEIEFVKEALISGSMKDGCQDQWKKVFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRTKDDECLILASDGLWDVMTNEEVCDLARRRILLWYKKNGFEQPSSERGEGTDPAAQAAAEYLSNRALQKGSKDNITVTVIDLKPQRKYKSKS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01484 526 CDD PP2Cc 212 516 IPR001932 -
Spst8g01484 526 SMART PP2C_4 199 514 IPR001932 -
Spst8g01484 526 Pfam Protein phosphatase 2C 248 509 IPR001932 -
Spst8g01484 526 Gene3D - 198 526 IPR036457 -
Spst8g01484 526 ProSiteProfiles PPM-type phosphatase domain profile. 211 516 IPR001932 -
Spst8g01484 526 ProSitePatterns PPM-type phosphatase domain signature. 262 270 IPR000222 GO:0043169
Spst8g01484 526 FunFam Protein phosphatase 2C 16 199 526 - -
Spst8g01484 526 PANTHER PROTEIN PHOSPHATASE 159 516 IPR015655 GO:0004722|GO:0006470
Spst8g01484 526 SUPERFAMILY PP2C-like 204 518 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01484 Spst-Chr8 15010067 15013257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01484 109 526 PP2C-type Phosphatase Gene Family AT1G17550 55.944 2.17e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01484 K14497 - gmx:100805281 906.746