Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01482 ATGTCGTCGGTGTACGTTCTAGAACCTCCAACGAAGGGAAAAGTGGTGGTGAGCACAACGCGCGGGCCTTTGGACATCGAGCTATGGCCGAAGGAGGCTCCGAAAGCCGTGAGGAATTTCGTGCAGCTCTGCCTCGAAAACTATTACGACAACATCATCTTCCACCGCGTCATCAAGGACTTTCTCGTCCAAGCCGGCGACCCCACCGCCTCCGGCACCGGAGGTGAAAGCATTTATGGTGGTGTTTTTGCTGATGAGTTCCATTCACGTTTAAAATTCAAGCACAGAGGAATAGTTGCAATGGCCAATGCTGGATCTCCAAATTCCAATGGAAGTCAGTTTTTCATCACTCTCGACCGGTGTGACTGGCTTGATCGCAAGCATACCATTTTTGGAAAAGTGACAGGAGATACAATGTATAATCTTTTGAGACTGGGTGAAGTTGAAACCGATAAGAATGACCGGCCTTTAGATCCCCCAAAGATTTTATCAGTCGAGGTTTTATGGAATCCATTTGAAGATATTGTTCCAAGAACACTTCAGAAACCTCTAACTCAAGCTAAAGCTGATACAGAAAATAAAGAGCCTAGGAAGAAAGGTGTAAAAAAATTGAACTTGCTTTCATTTGGGGGAGAAGCTGAAGAAGAGGAAAAGGTGGCATCAGTGAAGCAAAAGATTAAGAGCAGTCACGATGTCTTGAATGATCCTCGTCTTCTAAAGGAAGAAACTCCTATTAGTGAACTGAGTTCATCAAGAAGAGATCTGCATTTATCTGTAAGGGACGCACTTAACGCGAAGAAAGAAGAGCCTCAGAAAGATTCAGCCCCTGGTAACATGGCTCGTGTTGATTCCAGTGATGATGATGAAGCAGATTTTGATTCAAGAATGCGCATGCAGATACTCAAAAAGCGGAGGGAGTTGGGTGATCTCCCTCCCAAGCCTAAGTTGCAAAAAGGAGGAAGGTCCAGTCCAGAGAATCATGATATGTCATCACCAAGGTCCAATGCTGTTAGTGTTGATGAGGATCAACCAAAGGTAGAAAAGTTGTCCTTGAAGAAAAGGGGAGTAGGATCTGAAGCAAGAGCGGAACGAATGGCTAATGCCAATCCAGATCTGCAACTATTAAATGAAACTGAGAGAGGAAGGCAATTGCAGAAGCAGAAGAAACGCAGACTTCAAGGGCGTGAAGATGAAGTTCTGGCAAAACTTGAAAAATTCAAGAATTCTTTAGCAGCAAAGACGACACCCCCAGCTGCCGAATCTGGAGATGTTAATAATGAGGAGTTGTCTGACTGGAGAGGTGTTAGTTTAAAGTTTACCCCCGAGTCTGGCAAGGATCGCATGTCTCGCAATGAGGACCCAAATGACTATGTTGTGCACGACCCACTTCTGGAAAAGGGGAAAGAGAAGTTCAATAGGATGATAGCCAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAGATCTCTTACTTGA 1476 0.4499 MSSVYVLEPPTKGKVVVSTTRGPLDIELWPKEAPKAVRNFVQLCLENYYDNIIFHRVIKDFLVQAGDPTASGTGGESIYGGVFADEFHSRLKFKHRGIVAMANAGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKPLTQAKADTENKEPRKKGVKKLNLLSFGGEAEEEEKVASVKQKIKSSHDVLNDPRLLKEETPISELSSSRRDLHLSVRDALNAKKEEPQKDSAPGNMARVDSSDDDEADFDSRMRMQILKKRRELGDLPPKPKLQKGGRSSPENHDMSSPRSNAVSVDEDQPKVEKLSLKKRGVGSEARAERMANANPDLQLLNETERGRQLQKQKKRRLQGREDEVLAKLEKFKNSLAAKTTPPAAESGDVNNEELSDWRGVSLKFTPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMIAKQKRREREWAGRSLT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01482 491 MobiDBLite consensus disorder prediction 443 464 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 377 397 - -
Spst8g01482 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 CDD cyclophilin_CeCYP16-like 8 179 - -
Spst8g01482 491 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 201 IPR044666 -
Spst8g01482 491 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Spst8g01482 491 Gene3D - 2 182 IPR029000 -
Spst8g01482 491 MobiDBLite consensus disorder prediction 263 347 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 188 202 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 323 338 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 282 312 - -
Spst8g01482 491 SUPERFAMILY Cyclophilin-like 14 181 IPR029000 -
Spst8g01482 491 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 435 464 - -
Spst8g01482 491 MobiDBLite consensus disorder prediction 183 202 - -
Spst8g01482 491 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01482 Spst-Chr8 14990085 14996431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01482 9 172 U-box Gene Family AT5G67530 46.341 5.97e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01482 K12737 - gmx:100793148 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01482 8 14990085 14996431 Spst8g01482 8 14990085 14996431 ECH