LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g01481	ATGGCGCTGATATCTCCCCAAGCTGGCTCCAATACAACACCGTTGAATGTGACCATGGTCGCCGTGGACAAAGACAAGAACAGCGGCCACGCCTTTCGCTGGACCATCAAAAACATTGACAACCCCGTCATCATTGCTGTCTATGTCAAACACAAAAACATTTCTAATCAGGGCAACAATGTTTTACCTCCCGACGAAGACGATGTAGCCCACGTTTTCAACTCCTTACGTCAAATGTGTCCAGACAACGTTATGTTAAAAGAAGCAGTAATCGATGATAGTGAGGTTGTGAGAGGAATAGTGGAATATGCACAGAGAAATCGCGTCAATACTATAGTCGTTGGTGCACAACACTCCAGCAAGCATTCTTTGGCAAGGACTCTTAACCTGCGGAGTGGAAGCAAAAAATATAAAGGCCACCATGTGTCAACAGGCGTAATGAAATCAGCACCAGATTACACTTCAGTGTATGTGATTTCAAAAGGGAAGATAGTGGGAGCTCGACCAGCAATACGACCAATGGTAAACATGGTTGAACCACCTAAAGAAAATGGAGTAAGGACACATGCACATAAAAGTGGAAGCATCAATGGAAGATCAGAAAGATCACATCTACTTGAATTGCCAAGGTGTTCTTCAGCTGGTCACTCGTTGGATCAGAGGTCACTATTTAGCCCGACCTTGGGTGAAAGTGACTCTTCCGGATCGCATATGTTAGGGTCAGTAGATGATGGAATTAAACAAGAGGGTGATTCAGATTCTCCATCAGATTCTCAATTCACAGCAGATATGGAAGCTGAGATGAAAAAGTTGAGGCTCAAACTGAAGCAAACTATGGACATGTACAGCTCGGTTTGCAAAGACGTGGTAACAGCCCAAAACAAGGCTAAAGAAATTAACCAATGGAAACTGGAGGAAGAACGTATAGCTGAAGTGGCTAAGTTGTCTAAAGAGGCAGCTCTTGCAATGGCAGAAAAGGAGAAATTTAAAGCCAAAGCTGCCTTGGAAGCAGCTGAGGAAGCCATTAAGATGGTCGAAAAGGAAGCACAGAGAAGATTTCAAGCAGAGATGAAGGCTAGAAGAGAGGCACAAGAAAAGGATCGAGCATTGAATCAGTTGGCATGCAAGGATGTTCGATGCAGAAAATACACTATAAGCGATATTGAAGAGGTCACTCAAAAGTTCTCCCCGTCATTGAAAGTAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGCCAACTGGATCACACCCAAGTAGCAATCAAAATTTTGAACCCTGAAGCTACCCATGGCAGGAGGCAGTTCCAGCAAGAGGTTGAGGTATTATGCAGCATAAGGCATCCAAACATGGTTCTCCTCATTGGTGCATGTCCTGAGTACGGATGTTTAGTGTATGAGTACATGGAGAATGGGAGCTTGGAAGATAGATTATTGATGAGAAATGATACCCCTCCAATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAACCAATTGTGCACAGGGACCTCAAACCTGCTAACATTCTCTTGGACAGGAACTTTGTGAGCAAAATTAGTGATGTTGGTCTTGCAAGACTAGTACCAGCTTCTGTGGCTGATTCTGTCACACAATATCACTTGACTGCTGCTGCTGGAACCTTTTGTTACATTGACCCTGAGTACCAACAATCTGGGATGCTAACAACAAAATCAGACATATATTCCTTGGGGATAATGCTGCTACAAGTCATTACAGCCAAGCCTCCAATGGGGCTTGCTCACCATGTTAAGAGGGCCATTGAAGAGGGAAAATTTCCAGAAATGCTTGATCCTGTGATCACTGATTGGCCACTTGAAGAGGCTCTTGTATTTGCCAATCTCGCATTGAGTTGTGCAGAGCTCAGCAAAAAGGACAGGCCTGATCTTGCAAATGAAATAGTGCCAACGCTTAACCGTTTGAGGGACTTCGGTTTAGTATCACAGAACAAGCAGATTTGTAGCCACCCTCAACGCCCTTCCACGCCTACAAAAAGTCCACGATCATATTCATAA	2076	0.4412	MALISPQAGSNTTPLNVTMVAVDKDKNSGHAFRWTIKNIDNPVIIAVYVKHKNISNQGNNVLPPDEDDVAHVFNSLRQMCPDNVMLKEAVIDDSEVVRGIVEYAQRNRVNTIVVGAQHSSKHSLARTLNLRSGSKKYKGHHVSTGVMKSAPDYTSVYVISKGKIVGARPAIRPMVNMVEPPKENGVRTHAHKSGSINGRSERSHLLELPRCSSAGHSLDQRSLFSPTLGESDSSGSHMLGSVDDGIKQEGDSDSPSDSQFTADMEAEMKKLRLKLKQTMDMYSSVCKDVVTAQNKAKEINQWKLEEERIAEVAKLSKEAALAMAEKEKFKAKAALEAAEEAIKMVEKEAQRRFQAEMKARREAQEKDRALNQLACKDVRCRKYTISDIEEVTQKFSPSLKVGEGGYGPVFKGQLDHTQVAIKILNPEATHGRRQFQQEVEVLCSIRHPNMVLLIGACPEYGCLVYEYMENGSLEDRLLMRNDTPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPASVADSVTQYHLTAAAGTFCYIDPEYQQSGMLTTKSDIYSLGIMLLQVITAKPPMGLAHHVKRAIEEGKFPEMLDPVITDWPLEEALVFANLALSCAELSKKDRPDLANEIVPTLNRLRDFGLVSQNKQICSHPQRPSTPTKSPRSYS	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g01481	691	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	368	467	-	-
	Spst8g01481	691	Gene3D	Phosphorylase Kinase; domain 1	371	467	-	-
	Spst8g01481	691	MobiDBLite	consensus disorder prediction	222	259	-	-
	Spst8g01481	691	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	513	525	IPR008271	GO:0004672\|GO:0006468
	Spst8g01481	691	ProSiteProfiles	Protein kinase domain profile.	395	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01481	691	MobiDBLite	consensus disorder prediction	179	202	-	-
	Spst8g01481	691	Coils	Coil	312	366	-	-
	Spst8g01481	691	Gene3D	HUPs	7	160	IPR014729	-
	Spst8g01481	691	SMART	serkin_6	395	658	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01481	691	Pfam	Universal stress protein family	19	131	IPR006016	-
	Spst8g01481	691	MobiDBLite	consensus disorder prediction	671	691	-	-
	Spst8g01481	691	Coils	Coil	261	281	-	-
	Spst8g01481	691	SUPERFAMILY	Protein kinase-like (PK-like)	378	650	IPR011009	-
	Spst8g01481	691	MobiDBLite	consensus disorder prediction	222	238	-	-
	Spst8g01481	691	MobiDBLite	consensus disorder prediction	184	202	-	-
	Spst8g01481	691	Gene3D	Transferase(Phosphotransferase) domain 1	468	675	-	-
	Spst8g01481	691	Pfam	Protein kinase domain	400	648	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst8g01481	691	PANTHER	OS02G0152300 PROTEIN	18	679	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g01481	Spst-Chr8	14899727	14904219	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g01481	86	665	Receptor kinase-like Gene Family	AT5G12000	57.861	0.0	668

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Spst8g01481		Pkinase	1.4e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g01481	-		-	gmx:100786386	1029.24