Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01479 ATGAGTACTAAAAGGAACACATGGAAGTCTGTGATCTTGATCTTAAATTGTTACAAGGTTAAGTGCCCCTTGAAGGAATCTGAGAAACAGGTTTTGAAACAAGGGTCTTTCCAGAGGCTGTGTTTATCTGATGTGAGCAACCCAAGCTCCACTCAGGCCATTGAGGATCTTTCAATTTCCTTTGCTGGCTCAAAACTTAATGCATTCACACTTGATGAGCTAAGGGAAGCAACGCACAATTTCTCATGGAGTAATATGCTAGGAGAAGGAGGGTTTGGACCTGTGTACAAGGGTTTTGTGGATGACAAACTGAGGCCAGGTTTGAAAGCTCAGACTGTTGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTCAAGCTAATTGGGTACTGTTATGAGGATGAACACAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCTATGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCTGCCAAAGGTCTGGCCTTCCTTCATGAAGCAGATAAGCCTGTAATATACCGCGATTTCAAAGCTTCCAACATTTTACTAGACTCAGATTTCACAGCTAAACTCTCAGACTTTGGTCTAGCCAAGGATGGCCCTGAAGGGGAAGACACACATGTAACAACACGCATAATGGGAACACAAGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTAGTGCTGTTGGAACTGCTTACAGGAAGACGAGTGGTGGATAAGTCTCGGTCGAATGGTGGGAAGAGCTTAGTGGAATGGGCAAGGCCTATGCTGAGAGATCAGAAAAAGGTTTACAGCATCATAGATAGTAGACTAGAAGGGCAATTTCCCATGAAAGGGGCCATGAAAGTTGCTATGTTGGCTTTTAAATGCTTGAGTCATCACCCAAATGCAAGGCCAACTATGAGTGATGTGGTGAAGGTGTTGGAGCCACTTCAGGACTTCGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTCAGTGAAAATGGTAACAAACATAAAATATAG 1161 0.4401 MSTKRNTWKSVILILNCYKVKCPLKESEKQVLKQGSFQRLCLSDVSNPSSTQAIEDLSISFAGSKLNAFTLDELREATHNFSWSNMLGEGGFGPVYKGFVDDKLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNGGKSLVEWARPMLRDQKKVYSIIDSRLEGQFPMKGAMKVAMLAFKCLSHHPNARPTMSDVVKVLEPLQDFDDVFIGPFVYVAVSENGNKHKI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01479 386 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Spst8g01479 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Spst8g01479 386 CDD STKc_IRAK 87 361 - -
Spst8g01479 386 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Spst8g01479 386 SUPERFAMILY Protein kinase-like (PK-like) 58 359 IPR011009 -
Spst8g01479 386 Gene3D Phosphorylase Kinase; domain 1 43 163 - -
Spst8g01479 386 FunFam Probable serine/threonine-protein kinase PBL8 164 372 - -
Spst8g01479 386 PANTHER OS01G0588500 PROTEIN-RELATED 51 362 - -
Spst8g01479 386 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01479 386 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01479 Spst-Chr8 14879072 14881137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01479 69 358 Glycoside Hydrolase AT3G07070 53.242 3.05e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst8g01479 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01479 - - gmx:100802636 741.11