Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01477 ATGGCGGCGAAGGTTTTAAAAGAGACAAAGTCGATGACAGCGGCGGAGATGGCAGCGGAGACGGCGGAGACTGTGGTGTCGTCGGTGAAGTGCTGCTGCTGCGGGTTGGTGGAGGAGTGCACGCATGCATACATTGGGCGCGTGAAGGAGAAGTACGGAGGGCGTTGGATTTGTGGGCTGTGTGCGGAGGCAGTGAAGGAAGAGAGGGAGAGAGAAAATCACGATAACAACCGACGAAGCGCTGAAGCGACACATGAAGTTCTGCCAACAGTTCAACTCCTTCACTCCTCCCGACAGCACCAACGAGGATTTCATCCTCGCCGTCAAACAGATCCTGTTCCGAACTTTGGATTCTCCAAGGAAAGACCGTTTCAGTTGTCGCCCACTTGGGAGATCTCACAGCTGCTTCTCAACCATGCAAGGAACGCATGA 432 0.544 MAAKVLKETKSMTAAEMAAETAETVVSSVKCCCCGLVEECTHAYIGRVKEKYGGRWICGLCAEAVKEERERENHDNNRRSAEATHEVLPTVQLLHSSRQHQRGFHPRRQTDPVPNFGFSKERPFQLSPTWEISQLLLNHARNA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01477 143 PANTHER OS01G0745000 PROTEIN 16 82 IPR012876 -
Spst8g01477 143 MobiDBLite consensus disorder prediction 97 118 - -
Spst8g01477 143 Pfam Protein of unknown function (DUF1677) 26 86 IPR012876 -
Spst8g01477 143 MobiDBLite consensus disorder prediction 69 88 - -
Spst8g01477 143 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01477 Spst-Chr8 14684810 14685241 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01477 - - vum:124842347 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01477 8 14684810 14685241 Spst8g01477 8 14684810 14685241 ECH
Spst9g00665 9 5783034 5783438 Spst8g01477 8 14684810 14685241 ECH
Spst3g02772 3 77259912 77260349 Spst8g01477 8 14684810 14685241 ECH
Spst4g02141 4 62181739 62182221 Spst8g01477 8 14684810 14685241 ECH