Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01449 ATGATTATCATCCTAGAGAGCCGGGTGGAATATTGCATTACAAAGGAGGGAAATCATCAGCTCATGGTTCTTCAGATAGGTGAAATCACCATTGGTGTTAGAGTATTTTCGATTTCCTCCCCTTTCAATTCCCCAAATATAGATGAGACAAAAAAATTGAATGGGAACAGCTTAGCTAAATTTCCTCGGAGAACTAGTGGTTCATCTGGACTTCATCTTCAGGCACAACAGTCTGAAGATCAATTACAGCAGCAGTCACAGCCTCAGCAGCCACCCCCGCATATGGTTCCCCGTACTTCAAATGGTGATCAAAACTCTGTGCAAACTGCTGCTATGCAAATTGCTTCTACCAATGGTGTGACAAATGTAAATAATTCTGTCAATGCAGCATCTGCATCAACTACCACCAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGCCCTTATGGAGGTAGTTCTGTTCAAATTCCATCCCCAGGTTCCTCTGGTAATGTGCCACAAGCGCAGCCGAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAACCCACAAACATCTCATCCTGCCTTAACATCTGCAAATCACATGGGTACAGCAAATTCACCAGCTAATATTTCCTTGCAACAACAGCAGACATCCATTCCTGCTGAATCCGACACAACCGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAGATGATGATGTCCTCCCAGATGAATGGCCCAGGTGGCATGGCTGGCTCTGGTTCTCTTGGAAACGACATGAAAAATGTAAACGGGATTCTTCCAGGTAGTAACAATACGGGTCTCAACAGTAACAATGGCAGTGCCCTGGTAGGTAATGGGGCTATGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTTCAATGACCAATGGAATGAGACCTGTAATGGGACATAATTCCATCATGAATGGAAGGGGAGGAATGGCATCTATTGCTCGCGATCAGGTTATGAATCAGGATTTGTCAACCCAACTACTTAGTGGGTTAGGAGCAAGCCGTTGTAATCTTGTGGATGTTGCGATTCTTGGGCGGCTGCTTGTGCAGCATGAGAAATGCTGCAATTGCCCTTGGCCCCTGGAAATGGCAGAACGCAATGGGAAAGTTGATAGCTTGGGGCTGCAAACTGCATGTGGCTATGTTCGTCAGCAGTGGACAAGCCCGGGCACCGTAGATAAAGTTGACTAG 1287 0.4577 MIIILESRVEYCITKEGNHQLMVLQIGEITIGVRVFSISSPFNSPNIDETKKLNGNSLAKFPRRTSGSSGLHLQAQQSEDQLQQQSQPQQPPPHMVPRTSNGDQNSVQTAAMQIASTNGVTNVNNSVNAASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHPALTSANHMGTANSPANISLQQQQTSIPAESDTTDAQSSVQKIIHEMMMSSQMNGPGGMAGSGSLGNDMKNVNGILPGSNNTGLNSNNGSALVGNGAMNSNSGVGVGGYGTMGLGPSSMTNGMRPVMGHNSIMNGRGGMASIARDQVMNQDLSTQLLSGLGASRCNLVDVAILGRLLVQHEKCCNCPWPLEMAERNGKVDSLGLQTACGYVRQQWTSPGTVDKVD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01449 428 MobiDBLite consensus disorder prediction 150 217 - -
Spst8g01449 428 MobiDBLite consensus disorder prediction 49 89 - -
Spst8g01449 428 PANTHER LIM DOMAIN-BINDING PROTEIN 56 363 IPR029005 -
Spst8g01449 428 MobiDBLite consensus disorder prediction 49 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01449 Spst-Chr8 13663370 13669229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01449 22 279 C2H2 Transcription Factor Family AT1G43850 44.674 1.95e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01449 - - gmx:100798031 427.172