Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01448 ATGGTTCCTCCTGGGCCACCTACGCCTCTTGGTGGTGCCCAGTCTGTGCCGTCACTTTTGAGATCGAATTCCGGAATGTTGGGGGGTCAAGGGGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCGCTGGTTGCGCAGCGAAATCAGTTTAACAACATGAACATGCTAGGTAATATGTCTAATGTAACTTCCTTACTGAATCAGTCTTTTCCCAATGGAATTCCAAATTCTGGGTTGGCTGGCCATGGGAGCAGCCAGCGTGGTGGAGGCGTTGATGCTGGGGCGGAATCGGATCCGCTGTCTGGTGTTGGCAGTGGAATGAATTTTGCCAATACTTTGCAATCGAATTTGGGGAACCCGGGTTCATCTGGTCAAGGTCAGGGTCAGCAATTTTCAAATGCTTCTGGTAACCAGATGTTGCCAGATCAACAGCACTCCCAGCAACTCGAACCTCAGAGTTTTCAGCATAGTCAGCAGTCAATGCAACAGTTCTCTGCTCCTCTTAACGCTCAGCAGCAACAGCAGCATTTTCAGTCAATTCGAGGTGGAATGGGTGGTGTTGGATCGGTTAAGTTGGAGCCGCAGTTAAACAACGATCAGTTTGGGCAGCAACAACAATTGCCCTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCACAACAACTTCAAACAATGAGAAACATGGCAGCTGTAAAAATGGAGCCTCAACATGATCAGCAATTTTTGCAGCAGCAACAGCATCAACAACAACAGCAACAACTTCTCCACATGTCAAGACAATCCTCTCAGGCTGCTGCTGCACAGATGAATCATCTTTTGCAGCAGCAGAGACTTTTGCAATATCAGCAACACCATCAGCAGCAACAGCAGCAACTCTTGAAGGCAATGCCTCAACAACGGCCCCATCTACCACAGCAATTTCAACAGCAGAATATCCGGTCTCCTGTGAAACCACCATATGAACCTGGAATGTGTGCTAGACGGCTGACACATTACATGTATCAGCAACAACGTAGACCTGAAGATAATAACATCGAATTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCGAACGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAGACTACTGGAGTTTTCCCTCAGGATGTATGGCATTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTACGAAAGTGGTACATTGGAAGAGCTCCTTTATGTTGACATGCCTCGTGAATATCACAATTCATCTGGCCAGATTGTTCTGGATTATGCGAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGCATTGTTCGAGATGGTCAACTGCGAATAGTTTTCTCTCCAGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAAGAGCTCATTCCCAGAAGATTGTTGATACCTCAGTCTGTTAGTGTTGTTGATATTAAGAAATTGGAATGTGTAATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTGGAAGTTCCATTGGTCAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAAAGACTGGACCCATGGGCACTGCAATGAAGGGAGATATCCCTTGGAGCTGTGGGGATCTGTTCATTAAAATGATTGCAATATGTCAGCGGGGCCAGTGGGTCAAATATGCTTTGGTTCTTGTATATTCTAGCAAAGTGCGATCAGGAGAACATCTACACCTTGGTGCTCATAAGTTGGTCAATATTATGCTAGAGTCAGAGAAGCTGGGTGTCTATCCCCTACTCCAAAGTATCAATGTTGCTGTTGGGGTGATGCAGACAAAGGATTATAATTACAAATAG 1947 0.4515 MVPPGPPTPLGGAQSVPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMLGNMSNVTSLLNQSFPNGIPNSGLAGHGSSQRGGGVDAGAESDPLSGVGSGMNFANTLQSNLGNPGSSGQGQGQQFSNASGNQMLPDQQHSQQLEPQSFQHSQQSMQQFSAPLNAQQQQQHFQSIRGGMGGVGSVKLEPQLNNDQFGQQQQLPSRNLAQVKLEPQQLQTMRNMAAVKMEPQHDQQFLQQQQHQQQQQQLLHMSRQSSQAAAAQMNHLLQQQRLLQYQQHHQQQQQQLLKAMPQQRPHLPQQFQQQNIRSPVKPPYEPGMCARRLTHYMYQQQRRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRIVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQSVSVVDIKKLECVMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETKTGPMGTAMKGDIPWSCGDLFIKMIAICQRGQWVKYALVLVYSSKVRSGEHLHLGAHKLVNIMLESEKLGVYPLLQSINVAVGVMQTKDYNYK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01448 648 MobiDBLite consensus disorder prediction 15 40 - -
Spst8g01448 648 PANTHER LIM DOMAIN-BINDING PROTEIN 36 560 IPR029005 -
Spst8g01448 648 MobiDBLite consensus disorder prediction 104 180 - -
Spst8g01448 648 MobiDBLite consensus disorder prediction 76 193 - -
Spst8g01448 648 MobiDBLite consensus disorder prediction 289 315 - -
Spst8g01448 648 MobiDBLite consensus disorder prediction 289 320 - -
Spst8g01448 648 Pfam LIM-domain binding protein 328 560 IPR029005 -
Spst8g01448 648 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01448 Spst-Chr8 13658100 13662449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01448 1 565 C2H2 Transcription Factor Family AT1G43850 64.500 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01448 - - gmx:100798031 850.892