Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01443 ATGTCATTGGTTATATCTACAGAGTTGGCGGATACATCATATAGGAATGCCAAGCTCTACACACTAAAGGGAACTGATGTTTCACCTGATCTGTCCTCCCACAATTTTGTTCCGGATAAGCACAGAAACATGTATTTCACAGATTCTTACTCGAGTGAGAGTTATGAAAAGTACTTCCACGATTCTCCATCAGAAGAACTAATAGAACCATCTAGTTCCAGCATATCAGGAAATTCAGTTCAGCCCGATGGTGCTTCTTACCTGCTCAGAGCTAGTTCAGGAGCTTCTGTGATTGTTAATAACCCATTTGACGCTTCTATCCGGTCTACAAGGCGTCACCATGCCCATCAGTCCAATTTTGGATCAGATTTCGTGGAAAATAGGAGCCCTGATGGCCTTGACTTTGATGGTGAAATGAGATTAAAATTACAAGAATTGGAAAGGGCTTTGTTTTCTAATGAAGAAGAGGAGGAGGAAGACATATTTGAGACTGTGCAAAGCATGGATATTGATCCTGACATGGCCGAGTGGGCCAATCCGCTTCAAGATATGCTGCTCCATGACTCACCAAAGGAGTCTTCATCCTCAGATTCTTCCAATATTAGCAGCATAAGCAGCACCACCAAAGAAACTTCACAAAACTCGCCCCAGACCCCCAAACAATTACTTTATGATTGTGCTAGAGCACTTTCAGAAGGAAATGAACAGGAAGCCACATCTATGATAAACAATCTCAGGCAAATGGTCTCCATTCAGGGTGATCCTTCTCAAAGAATTGCAGCCTACATGGTGGAAGGGCTTGCAGCTCGCGTTGCTTCCTCTGGAAAATGCATCTATCAAGCATTGAGATGCAAGGAACCTCCTTCTTCAGATCGCTTGGCAGCTATGCAGATACTATTTGAGGTCTGCCCATGTTTTAAATTCGGATTCATTGCTGCAAATGGCGCCATAGCTGAGGCTGTTAGGGATGAAAAGAAGGTTCACATAATAGACTTTGATATCAGCCAGGGAACTCAATACATAACTCTAATACAAACACTTGCTTCAATGCCAGGTAGGCCACCTCATGTGAGATTAACCGGGGTGGATGATCCCGAGACCGTGCAGCGCTCCATTGGTGGCATAAACATCATAGGACAAAGACTTGAAAAGCTGGCAGAAGAACTTGGATTGCCATTTGAGTTTCGAGCAGTGGCTTCAAAAACCTCAATTGTCTCTCCATCAATGCTCAATTGTCGTCCGGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCGTGATGAAACTGTATCCACAGTGAACGAGAGAGACCAGCTTCTTCGCATGGTCAAGAGCTTGAAGCCAAAACTTGTGACAATTGTGGAGCAGGACATGAACACCAACACCTCCCCTTTTCTCCAAAGATTTGTTGAAGCATACAATTACTACTCTGCTGTTTTTGACACACTTGATGCAACTCTACCTAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCCAAGGACATTGTCAACATTGTGGCGTGTGAGGGCGAGGATAGAATAGAACGGTATGAAGTCGCCGGAAAATGGAGGGCAAGGTTGACAATGGCTGGCTTCACTCCATCCCCAGTGAGCTCAAATGTGAGAGAAGCAATTAGGAAACTCATTATTAAGCAGTACTGTGACAGGTTCAAGATAAAGGAGGAAATGGGAGCACTTCATTTTGGGTGGGAAGACAAAGACTTAATTGTTGCTTCAGCGTGGAAGTAA 1773 0.4439 MSLVISTELADTSYRNAKLYTLKGTDVSPDLSSHNFVPDKHRNMYFTDSYSSESYEKYFHDSPSEELIEPSSSSISGNSVQPDGASYLLRASSGASVIVNNPFDASIRSTRRHHAHQSNFGSDFVENRSPDGLDFDGEMRLKLQELERALFSNEEEEEEDIFETVQSMDIDPDMAEWANPLQDMLLHDSPKESSSSDSSNISSISSTTKETSQNSPQTPKQLLYDCARALSEGNEQEATSMINNLRQMVSIQGDPSQRIAAYMVEGLAARVASSGKCIYQALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHVRLTGVDDPETVQRSIGGINIIGQRLEKLAEELGLPFEFRAVASKTSIVSPSMLNCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLKPKLVTIVEQDMNTNTSPFLQRFVEAYNYYSAVFDTLDATLPRESQDRMNVERQCLAKDIVNIVACEGEDRIERYEVAGKWRARLTMAGFTPSPVSSNVREAIRKLIIKQYCDRFKIKEEMGALHFGWEDKDLIVASAWK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01443 590 MobiDBLite consensus disorder prediction 186 219 - -
Spst8g01443 590 Pfam GRAS domain family 220 590 IPR005202 -
Spst8g01443 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 200 585 IPR005202 -
Spst8g01443 590 ProSiteProfiles GRAS family profile. 210 590 IPR005202 -
Spst8g01443 590 MobiDBLite consensus disorder prediction 188 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01443 Spst-Chr8 13612864 13614636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01443 1 590 GRAS Transcription Factor Family AT1G21450 60.601 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst8g01443 GRAS 8.3e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01443 - - gmx:100807048 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01443 8 13612864 13614636 Spst8g01443 8 13612864 13614636 ECH