Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01439 ATGGCTGGGCAATCTAACCATGAGCTTTCACTGTTTTCAGCAGAGGAACTTGAGTTCATTGCTGAGGATGAGATCGTTGACATTGTACCGAATCTCAAAATGGGACCTCTCAATTTCATTTCTGGGGATTTTGGCCCATTTACGCCACAGATTGTTACTCAAGTACCGCTGTGGTTGGCCATTGCTCTCAAGAAGAGAGGCAAGTGCTCCATTCGCCCTCCCCTGTGGATGTCCGTCGAGAAGTTGAGTCAAGTTCTGGAGGCAGAGCGAGACTCTCAAGAGATGTCAGATCAATTGCCATTTCATTATGTGGAAATCTCAAGACTTCTTTTTGATCATGCTCGTGACAACATTCCTGATGTATATATGGTGAGGTCTCTTATTGAAGACATCAGAAATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAAGCATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTATCTGCGATGGAAGTGAATATTGTTCGTCCATTTATTGGAAGAGCTTTACAAGCATTTTATAAGCATGATAGTCCAGAGTTGATACCAGACCCAGAGAGAGTTTCTGACAGGCGGCCCCAAGTTGTCAACAATGCCCCAAGAAGACAACTACGAAGATAG 633 0.425 MAGQSNHELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFTPQIVTQVPLWLAIALKKRGKCSIRPPLWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPDVYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVSDRRPQVVNNAPRRQLRR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01439 210 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Spst8g01439 210 Pfam GINS complex protein 53 162 IPR021151 -
Spst8g01439 210 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Spst8g01439 210 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Spst8g01439 210 CDD GINS_B_Psf2 13 74 - -
Spst8g01439 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 204 IPR007257 GO:0005634|GO:0006260
Spst8g01439 210 Gene3D - 12 77 - -
Spst8g01439 210 MobiDBLite consensus disorder prediction 185 210 - -
Spst8g01439 210 CDD GINS_A_psf2 66 182 - -
Spst8g01439 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Spst8g01439 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Spst8g01439 210 Gene3D - 78 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01439 Spst-Chr8 13587790 13589937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01439 1 147 Core DNA Replication Machinery Family AT3G12530 68.707 3.54e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01439 K10733 - gmx:100780528 399.053