Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01431 ATGGAAATTCCTCTCCCTTCTTACGTCGTGGTTGCATGTGATGCCACTAAAGATCGCAATGAGCATGAGATCAAGCTTGTGGTCGATCACCTTCAAAGCAGGAGTGGCATTATCAGTGCAAGTAATAGCTTTCTTGTGCTCGGTGCTTTGCATAAGGTTCCGCATCCAATGGGGTACCAGACATTAGCATGCCCGGAGTCCTTTGCTGGCACTAATATTCGTGCAATGGAGGAAGAAGTTAACAGAAAAATTGCAACATATAAAAGTGTGCTTCTCCGGAGTAATGAAGAACGTGAAAATAAAGGGGTTAGAATCGAGGTTAAAGTCACAGCAGGTTTTCCGATTAGGCAGCGTGACCTGAGATTCTACAGGAACAAGATAACGTGTAAAATTGCTTTGGTTAAAGATGACTTTTCGGTGGATATTTGGAGATCACATCATATAGATGAAACATATGTGGCAGAACAAAAGCTTATTTACTCTTTTTCCAAGTGTGTTTCACTATCAGATTTTCATAGTGTTGATCATGAGGACCAATCTGTTACCGTATGCAAAACCTATCCTCTTTCCATTACTTCTGACAGTTCTAAGATCAATACAAAACATTCAAATGCTAACAAGGCTGCGGAGCATAATATTTCACCATATTTTGGATCATTTTCAGATCCTCCAATTCTTTGTGCTGGTTGTGGGACTCACACTGCATTGTATACCAACGAGTTAAAGAGGTTCAGCTACTCTGAGATTCAACTTGCAACAAATGATTTTTCAAAGGATAACGTATTAGGTGAAGGTGGATATGGACATGTATACAAGGGCATACTTAAAGATGGGCAACAAATAGCTGCTAAAGTAAGGAAAGAGCAAAGTAAACAAGGGTCTTCTGAGTTCAATTCTGAGGTTTACGTGCTGAATTTTGCTCGCCACAAGAATATAGTTATGCTATTGGGTTACTGTTTCAAAGAAAGGCTAGATATTTTGGTATATGAGTATATCTGCAACATGTCTCTTGATTGGCATTTATTTGATGAAAATGCCCCAGTTCTTGAGTGGCACCAAAGATATGCCATCGCTATTGGAACTGCGAAAGGATTGCGTTTTCTGCATGAAGAATGTCGTGGAGGTCCTATCATTCATCGTGACCTGGGTGACTTTGGCCTTGCCAAATGGAAGACTAGTGATAAGATTCTACAAACAAGGATAATGGGCACATTAGGATACCTTGCCCCTGAGTATGCTGAAGACGGTATTGTTTCTGTTGCAGCAGATGTGTATGCTTATGGCATTATTCTTTTACAACTGATAACAGGACGCAAGGCAACTTCTAGCCCAGAGCAAAATCTCTCCCTTCGACAATGGGCTGAGGCCAAGATTGAGAAGTTGGCATTTCACGAACTTATAGATTCTCGTATTGCGCATTCATATAACTCAAACGACCTATACATGATGGCCAAGGTAGCATACTACTGTGTGCAAAGAAATCATGAGAAGCGACCCTCCATTGCAGAGGTTGTTCGTCTTCTTGAGGGACAAAATGACCTTTACTGTTCCATTAATGCACATCAATTTCGGATCGAAACATAA 1584 0.4072 MEIPLPSYVVVACDATKDRNEHEIKLVVDHLQSRSGIISASNSFLVLGALHKVPHPMGYQTLACPESFAGTNIRAMEEEVNRKIATYKSVLLRSNEERENKGVRIEVKVTAGFPIRQRDLRFYRNKITCKIALVKDDFSVDIWRSHHIDETYVAEQKLIYSFSKCVSLSDFHSVDHEDQSVTVCKTYPLSITSDSSKINTKHSNANKAAEHNISPYFGSFSDPPILCAGCGTHTALYTNELKRFSYSEIQLATNDFSKDNVLGEGGYGHVYKGILKDGQQIAAKVRKEQSKQGSSEFNSEVYVLNFARHKNIVMLLGYCFKERLDILVYEYICNMSLDWHLFDENAPVLEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDLGDFGLAKWKTSDKILQTRIMGTLGYLAPEYAEDGIVSVAADVYAYGIILLQLITGRKATSSPEQNLSLRQWAEAKIEKLAFHELIDSRIAHSYNSNDLYMMAKVAYYCVQRNHEKRPSIAEVVRLLEGQNDLYCSINAHQFRIET 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01431 527 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 228 331 - -
Spst8g01431 527 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Spst8g01431 527 Pfam Protein kinase domain 257 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01431 527 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 219 512 - -
Spst8g01431 527 SUPERFAMILY Protein kinase-like (PK-like) 237 511 IPR011009 -
Spst8g01431 527 Gene3D Transferase(Phosphotransferase) domain 1 333 521 - -
Spst8g01431 527 ProSiteProfiles Protein kinase domain profile. 256 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01431 527 Gene3D Phosphorylase Kinase; domain 1 230 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01431 Spst-Chr8 13497812 13502375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01431 177 509 Trihelix Transcription Factor Family AT5G38560 38.122 1.72e-72 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst8g01431 Pkinase 3.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01431 - - vun:114163670 671.774