Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01425 ATGCTGTACTTAATATACCAGAAAAGGAAGCTCAGTAAACTAAAAGAGAAGTTCTTTCAGCAGAATGGGGGTTTGATTTTGCTACAAAAACTTTCTGGAAGAGAAAACACTTCTCAAACCGCTCAACTTTTCACAGAAGAACAACTAAAGAAGGCCACTAACAACTTTGATGAGAGCTTAATCATTGGCAAAGGAGGTTTTGGTACGGTTTTCAAAGGATTTCTGGCAGATAACAGAATTGTAGCTATCAAGAAATCCAAAATAGTTGATGAGAGCCAAAAGGAACAATTCATTAACGAGGTGATTGTTCTGTCTCAAATCAATCATAGGAATGTGGTCAGACTCTTGGGATGTTGCTTGGAAAGAGAAGTTCCTTTACTGGTTTATGAATTTGTTACTAATGGCACCCTTTTTGATTTTATACACACCGAAAGAAAGGTAAATAATGAAACTTGGAAAACCAGACTAAGGATAGCAGCAGAAGCAGCTGGAGCTCTAGCATACCTTCACTCTGCAGCCTCAGTACCCATTATCCACAGAGATGTCAAGACTGCTAACATACTCTTGGATGACACTTACACTGCCAAAGTTTCCGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAATAGCCACCATGGTGCAAGGAACTTTTGGTTACCTGGATCCAGAGTACATGCTTACAAGCCAACTAACTGAAAAAAGTGATGTCTATAGTTTCGGAGTAGTGCTTGTTGAGCTTCTAACAGGGGAGAAACCTCATTCTTTTGGGAAGCCAGAAGAGAAAAGAAGTCTTGCTAACCACTTTCTGTCTTGCTTGAAAGAGGATCGCTTGTTTGATGTTCTTCAAGCCGGCATAATGAATGAAGAATGTTGGGAAATAAGGTCGGATAAGATGGAATAA 912 0.3947 MLYLIYQKRKLSKLKEKFFQQNGGLILLQKLSGRENTSQTAQLFTEEQLKKATNNFDESLIIGKGGFGTVFKGFLADNRIVAIKKSKIVDESQKEQFINEVIVLSQINHRNVVRLLGCCLEREVPLLVYEFVTNGTLFDFIHTERKVNNETWKTRLRIAAEAAGALAYLHSAASVPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATMVQGTFGYLDPEYMLTSQLTEKSDVYSFGVVLVELLTGEKPHSFGKPEEKRSLANHFLSCLKEDRLFDVLQAGIMNEECWEIRSDKME 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01425 303 FunFam Wall-associated receptor kinase 2 132 299 - -
Spst8g01425 303 Pfam Protein kinase domain 60 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01425 303 Gene3D Phosphorylase Kinase; domain 1 26 131 - -
Spst8g01425 303 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 294 IPR045274 GO:0007166
Spst8g01425 303 Gene3D Transferase(Phosphotransferase) domain 1 132 302 - -
Spst8g01425 303 SMART serkin_6 56 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01425 303 SUPERFAMILY Protein kinase-like (PK-like) 36 287 IPR011009 -
Spst8g01425 303 ProSitePatterns Protein kinases ATP-binding region signature. 62 85 IPR017441 GO:0005524
Spst8g01425 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Spst8g01425 303 ProSiteProfiles Protein kinase domain profile. 56 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01425 303 FunFam Wall-associated receptor kinase 2 26 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01425 Spst-Chr8 13410089 13411000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01425 7 292 Receptor kinase-like Gene Family AT1G21230 61.538 4.01e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst8g01425 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01425 - - gmx:100781051 514.998