Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01418 ATGGGATGGAAGGCCACGCAGAAGCAACTGACCAGACTGACCGTGGTGTTACTGATGGCGTTAGCAGCCGCCGGCCAAGCCCTGCCGGGCTGCCCTGACTCCTGCGGTGGTGTTTCATCAATTCCGTATCCATTTGGCGTGGGCTATTCATCCGTCACGGGTGAAAAGTGTTTCTTGGAGGAAACATTGGAGCTTACATGCAGAAACTCCACCTTATATCACGGTGGTGGTAACGTCCAAATTCTGAACATAAGCCTCGCTGGTAAAATGGACATGCTCATCTTCACCTCGAACGCGTGCAAAAACGAACGTTTGGGTGCAGTCGAAACATTTGGTAACCTATGCAGTCTCGAAACACCGGCTTTCGCAATTTCTAGCGAGGACAACAAGTTCGTAAGCGTAGGGTGCGACTCTTACGGCTATCTCAATAGTTACCGCAACGGTACAGGATCTTCAACGGGGTGCTTGACGAGATGCAACAGCTTAGAGAGCGTTGAAATCATGCAGAGAAGCGGAAACTGCACGGGCATAGGGTGCTGCCAAGTGGATATACCTCCTGGGATGAAGAACATTAGTTTCCAAGCCTTCACCTTCAACAATTTCAATTCCACTTCTGATTTCAACAAGTGTGGCTACTCCTTTGTGGTGAAAAACGGCAACTATACTTTCTCCCTGGATCATTTAGACCAACTCCCATTCTCCATGGCACCCCTTGTCGTGGATTGGAGCGTTAGAAACGACACGTGTGACGCTTCCATGAGTAGAGCCGATTATGCATGCAAGAGTAATAGCCATTGTGAGAACTCGCCCTTTGGATATGGTTATCGATGCAAGTGTAATCCAGGCTTTCAGGGAAACCCCTACCTTCCCGATGGTTGCCAAGACATTTTGGAATGTAAAAGTAACCAACACAACTGCGCAAGTCAAGATTATTGTCGTGAAACTCCCGGCTCTTTTGAATGTTTCTGTCCCGATGGACTCATCGGAAATGGAACAACAGAAGGCGGAGGATGTCGACAAAAGCACCGGCCTGATCCATTTGTCAAGATCGTCATTGGCGCAGGTGCAGGATTAATCGCTCTCTTTATTGGGGTTTCTTGGCTATACTTGATGTACCAGAAAAGAAAGCTCCTCAAATTAAAGGAGAAATTCTTTCAGCAGAATGGGGGCATCATTCTCAGACAGCAACTCTCTACAAGACAAGACTCCTCTCAATCCACTACAATTTTCAGTGCCGAGCAACTTAAGAGAGCCACCAATGATTTTGATGAGAACTTAATCATCGGTAAAGGAGGTTTTGGTACAGTTTTCAAAGGAGTTCTCTCAAATAATAATGTTGTTGCTATAAAAAAGTCCAAAATAGTGGATCAGAGCCAGGTGGAGCAGTTCATTAATGAGGTCATTATACTGTCACAAATTAATCACAGGAATGTGGTCAAACTCTTGGGTTGTTGTCTAGAGACAGAAGTTCCTTTACTGGTCTATGAATTTGTTAATCATGGAACCCTTTTTGATTATATACATAATCAAGATCAGAAGGCTAATGTGTGCTGGAAAACGCGTCTAAGGATTGCCACGGAGGCAGCTGCAGCTCTGGCTTATCTACACTCAGCAGCTTCCATACCCATCATCCACAGAGATGTGAAGACTGCCAACATACTCTTAGATGACACTTACACTGCCAAAGTGTCTGACTTCGGAGCTTCAAGATTGGTTCCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAAGCCAATTGACCGAAAAAAGTGATGTCTATAGCTTCGGGGTAGTGCTTGTAGAATTGCTAACAGGGGAGAAACCTTTCTCTTTTGACAGGGCAGAAGAGAAACGAAGTCTTACGGTTCACTTTCTATGTAGTTTGAAAGAGGATCGTCTTTTTGAAATTCTTCAGATTGGTATTTTGCATAAAGAAAATAAGCAGGAGATTATGGAGGTTGCTGTTCTTGCTGCCAGGTGCTTGAGACTTAGAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGCTTATGGAGAAACATCCTTGGATCAACAATACAGGCCAAAATTTTGAGGAGAGTCAATACTTGCTTGGTGAGGCACAAAGCACTCGTGAACATGGTGACAGTAGTAGCCAACAAAATACTGGATATGATAGCTTGAGACAACTCGAGTTAATTGACTTCGGTAAAGGAAGATGA 2262 0.4483 MGWKATQKQLTRLTVVLLMALAAAGQALPGCPDSCGGVSSIPYPFGVGYSSVTGEKCFLEETLELTCRNSTLYHGGGNVQILNISLAGKMDMLIFTSNACKNERLGAVETFGNLCSLETPAFAISSEDNKFVSVGCDSYGYLNSYRNGTGSSTGCLTRCNSLESVEIMQRSGNCTGIGCCQVDIPPGMKNISFQAFTFNNFNSTSDFNKCGYSFVVKNGNYTFSLDHLDQLPFSMAPLVVDWSVRNDTCDASMSRADYACKSNSHCENSPFGYGYRCKCNPGFQGNPYLPDGCQDILECKSNQHNCASQDYCRETPGSFECFCPDGLIGNGTTEGGGCRQKHRPDPFVKIVIGAGAGLIALFIGVSWLYLMYQKRKLLKLKEKFFQQNGGIILRQQLSTRQDSSQSTTIFSAEQLKRATNDFDENLIIGKGGFGTVFKGVLSNNNVVAIKKSKIVDQSQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVNHGTLFDYIHNQDQKANVCWKTRLRIATEAAAALAYLHSAASIPIIHRDVKTANILLDDTYTAKVSDFGASRLVPLDQTEIATIVQGTFGYLDPEYMQSSQLTEKSDVYSFGVVLVELLTGEKPFSFDRAEEKRSLTVHFLCSLKEDRLFEILQIGILHKENKQEIMEVAVLAARCLRLRGEERPSMKEVAMELEGIRLMEKHPWINNTGQNFEESQYLLGEAQSTREHGDSSSQQNTGYDSLRQLELIDFGKGR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01418 753 FunFam Wall-associated receptor kinase 2 392 497 - -
Spst8g01418 753 FunFam Fibrillin 2 294 334 - -
Spst8g01418 753 SMART serkin_6 422 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01418 753 Pfam Protein kinase domain 426 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01418 753 Gene3D Phosphorylase Kinase; domain 1 388 497 - -
Spst8g01418 753 SUPERFAMILY Protein kinase-like (PK-like) 401 693 IPR011009 -
Spst8g01418 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 707 IPR045274 GO:0007166
Spst8g01418 753 Gene3D Laminin 246 298 - -
Spst8g01418 753 ProSitePatterns Protein kinases ATP-binding region signature. 428 451 IPR017441 GO:0005524
Spst8g01418 753 SUPERFAMILY EGF/Laminin 298 332 - -
Spst8g01418 753 ProSiteProfiles Protein kinase domain profile. 422 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01418 753 FunFam Wall-associated receptor kinase 2 498 715 - -
Spst8g01418 753 Gene3D Transferase(Phosphotransferase) domain 1 498 713 - -
Spst8g01418 753 FunFam Wall-associated receptor kinase 2 247 293 - -
Spst8g01418 753 Gene3D Laminin 299 335 - -
Spst8g01418 753 SMART egf_5 298 339 IPR000742 -
Spst8g01418 753 SMART egf_5 248 294 IPR000742 -
Spst8g01418 753 CDD EGF_CA 295 329 - -
Spst8g01418 753 Pfam EGF domain 299 333 IPR024731 -
Spst8g01418 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Spst8g01418 753 ProSiteProfiles EGF-like domain profile. 245 294 IPR000742 -
Spst8g01418 753 ProSiteProfiles EGF-like domain profile. 295 333 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01418 Spst-Chr8 13354337 13357009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01418 13 753 Receptor kinase-like Gene Family AT1G21230 44.106 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst8g01418 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01418 - - gmx:100819535 1142.87