Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01401 ATGCAGCTATATCATCATCCGTTGGATTTAGACAGCCAGAGGGTGAGACTTGCATTGGAGGAGGAGGGTGTGGATTATACATCTCACCATGTCAATCCCATTACTGGCAAGAACTTAGATTCCTCTTTCTTCAAGGTGAATCGCCATGGAAGGGTCCCTGTTTTTCAAAATGGTTCTCACATAATTTACAATACCATTGATATAATCCAGTACATAGAAAGAATTGCTGTAGTTTCTTCAGGGGCTGAGAGTATCAGTGCCAGTAACAGGGAAGTGATTGAATGGATGCAGAAGATACAAGACTGGGAGCCCAAGTTTTTCACACTTTCACATATACCCGATAAATACCGCTTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCTGAGTCACCTGAATTAGCAGGAGATTACCATAGGAAGTTGAGAGAAGCCTACGAGACTGAAGAAAAATTGAAAGAAGCAGATGTTTTGAGAAGGAGCAAGGAGCATTTGGTTAGAATTCTTGATGAGGTGGAGAGACAACTGTGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAATGAGTACATAAATGGAAGGCCAAACATTGCTGAATACTGGCTTTTGGTTCAGCAAAGGCCTAGTTATAAAAGGGTGATTGGTAAGTACTTTAATGGTTGGAGAAAGCACAAAACACTCTTAAAAACATGGTTCTTAGTTCGTATTCGAAGTTTGCTGAAGAGGTACTAG 804 0.4055 MQLYHHPLDLDSQRVRLALEEEGVDYTSHHVNPITGKNLDSSFFKVNRHGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGAESISASNREVIEWMQKIQDWEPKFFTLSHIPDKYRFYVSKFIRQVVIARMSESPELAGDYHRKLREAYETEEKLKEADVLRRSKEHLVRILDEVERQLCETPFLAGQDFTMADVMLIPVLARLKLLDLENEYINGRPNIAEYWLLVQQRPSYKRVIGKYFNGWRKHKTLLKTWFLVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01401 267 CDD GST_N_family 1 73 - -
Spst8g01401 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 251 IPR010987 -
Spst8g01401 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Spst8g01401 267 Coils Coil 159 179 - -
Spst8g01401 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Spst8g01401 267 SUPERFAMILY GST C-terminal domain-like 157 241 IPR036282 -
Spst8g01401 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Spst8g01401 267 Pfam Glutathione S-transferase, N-terminal domain 12 74 IPR004045 -
Spst8g01401 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Spst8g01401 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Spst8g01401 267 SFLD Main (cytGST) 1 231 - -
Spst8g01401 267 Gene3D - 129 238 - -
Spst8g01401 267 CDD GST_C_family 147 225 - -
Spst8g01401 267 Gene3D Glutaredoxin 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01401 Spst-Chr8 13084825 13085969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01401 1 267 Glutathione S-transferase Gene Family AT1G77290 69.288 1.04e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01401 K22077 - gmx:100808461 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01401 8 13084825 13085969 Spst8g01401 8 13084825 13085969 ECH
Spst8g01401 8 13084825 13085969 Spst9g01352 9 13243863 13245076 PCT