Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01399 ATGGCGATCTTATCAAAACTGTTGCCATTGCTACTGCTAATGCTGCTTCTTATCAAAACTGGCACCGCTCATAAAAAGTGCGAGGAGGAATTGTCTTGTGGGCCGAACCAACCGCTCATCCGATTTCCCTTCCAACTCGTCAAGGGGATGCACGAGGGATGTGGTTATCCCCGTCTTTGCCTCTCTTGCACTCATCAAAATCAAACCATGCTTGTCCTTCCTACCATCAAACTCCAAGTCATTGACATAGGCTACGAATCGCAGGAAATTACGTTAACTGACCCGGAAAACTGCTTTTCGAACAAGTTTAGACAACTCAACGATTTTATTCAGAGTTACCAGTTTGAATCATATTATGGATCACACAATTATAACTTGAGCTTCTTCAACTGTTCTTCACAAGATAGGATCTCCTGTCCGATTTACATTATTAGTTCTTTACAAAGTGTCACCGCATGGGATTTAATATCTTGTACCAAGATGTTCGACATCATTGCGCCAGTCGATGCATCCAGCCTGATGCACAATTATATGTATTTGAGATGGTCCAAAGCAATTTGTGCTGAGTGCGAAGCCAAAGGCAAGAGATGTAAATGGAAGAACGACAACAACACAGAAGGAGAAATCGAATGTTTTGACTGCAAAGGGAAAAGAATTCACCTTCCTAAATCTTTAAGGTTTGCTAGTACAGGCTCGATTATTTTGGGAGTGGTGGTAATTGTTGCCTTTAAGATCATCCTCTACTTTAGAAAGAAGGAAGAAGACCAAGCAAGAGTGGACAAGTTTTTAGAGGATTACAGGGCAGAAAAGCCTGCAAGATTCACCTACGCTGATCTGAAAAGAATCACGAATGGCTTTAAGGAAATGTTAGGAGAAGGAGCTCATGGGGCTGTATTCAGAGGAAAGCTTTCAAATGAGATTCTCGTGGCTGTGAAGATCCTCAACAATACAGAGGGAGAAGGGAATGAGTTCATCAATGAAGTCGGAATTATGGGCAAAATCCACCACATCAACGTGGTTCGTTTGCTTGGCTTCTGTGCAGAAGGACTCCATCGTGCTCTTGTCTACAATTTCTTTCCTAAAGGTTCCCTACAAACCTTCATATTTCCACCAGAAGACAGGGACCATTTCCTTGGCTGGGAGAAGCTTCAACACATTGCTCTTGGTATAGCTAAAGGGATTGAGTATCTTCACCAAGGTTGTAATCATCCCATTATTCACTTTGACATCAATCCTCACAACGTGTTACTCGAAGACAACTTCACTCCAAAAATTTCTGATTTTGGCTTGGCCAAATTGTGTTCCAAGAATCCTAGTTTGGTGTCCATGACAGCTGCTAGGGGAACCTTGGGATACATTGCACCTGAAGTCTTCTCCAGAAACTTTGGGAATGTGTCTTATAAGTCTGATATTTACAGTTATGGAATGCTGTTGCTAGAAATGGTTGGTGGAAGGAAGAATGTAGACATGTCTTCTACACAGAATTTCAATGTTCTATACCCGGATTGGATCCATAACCTGGTTGATGGAGATGTACATATCCATGTTGAGGATGAAGGTGGTGTTAAGATTGCAAAGAAACTAGCAATTATTGGGCTTTGGTGCATTCAGTGGCAACCAGTGAACCGTCCATCCATAAAATCTGTGATACACATGCTAGAAACTGAAGAAGAAAACAAGTTAGCTGTTCCTCCTAATCCATTTCACTCAACGACTTCAACCACTGTTAAGGGACCTACTTCAAGACGACCTTTGGAATTGGAAGTGATTCAAGAATGA 1779 0.4182 MAILSKLLPLLLLMLLLIKTGTAHKKCEEELSCGPNQPLIRFPFQLVKGMHEGCGYPRLCLSCTHQNQTMLVLPTIKLQVIDIGYESQEITLTDPENCFSNKFRQLNDFIQSYQFESYYGSHNYNLSFFNCSSQDRISCPIYIISSLQSVTAWDLISCTKMFDIIAPVDASSLMHNYMYLRWSKAICAECEAKGKRCKWKNDNNTEGEIECFDCKGKRIHLPKSLRFASTGSIILGVVVIVAFKIILYFRKKEEDQARVDKFLEDYRAEKPARFTYADLKRITNGFKEMLGEGAHGAVFRGKLSNEILVAVKILNNTEGEGNEFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNFFPKGSLQTFIFPPEDRDHFLGWEKLQHIALGIAKGIEYLHQGCNHPIIHFDINPHNVLLEDNFTPKISDFGLAKLCSKNPSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSTQNFNVLYPDWIHNLVDGDVHIHVEDEGGVKIAKKLAIIGLWCIQWQPVNRPSIKSVIHMLETEEENKLAVPPNPFHSTTSTTVKGPTSRRPLELEVIQE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01399 592 SUPERFAMILY Protein kinase-like (PK-like) 268 554 IPR011009 -
Spst8g01399 592 Gene3D Transferase(Phosphotransferase) domain 1 359 565 - -
Spst8g01399 592 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Spst8g01399 592 FunFam S-receptor-like serine/threonine-protein kinase 251 358 - -
Spst8g01399 592 ProSiteProfiles Protein kinase domain profile. 284 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01399 592 MobiDBLite consensus disorder prediction 563 584 - -
Spst8g01399 592 FunFam PR5-like receptor kinase 359 564 - -
Spst8g01399 592 Pfam Protein tyrosine and serine/threonine kinase 286 552 IPR001245 GO:0004672|GO:0006468
Spst8g01399 592 Gene3D Phosphorylase Kinase; domain 1 257 358 - -
Spst8g01399 592 MobiDBLite consensus disorder prediction 565 580 - -
Spst8g01399 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 256 571 IPR045874 GO:0004672
Spst8g01399 592 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01399 Spst-Chr8 13060293 13062319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01399 231 568 Receptor kinase-like Gene Family AT4G18250 42.693 3.73e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01399 PK_Tyr_Ser-Thr 7.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01399 - - gmx:102662104 905.205