Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g01398 | ATGTGTCTGCAGTTAAAGTTGGAACAGAAAGAGATTGGGCGTAAGATGTGGAAAGAGAGAGCATTATTGGTGACGTTGGTGTTTCTAATATACCAAAGTTGTGGTAGCAACAAGGAGCAAGAGCATAGATGCCCCCCTTCTTCCTGTGGCAAAATCCACAACATATCTTATCCATTCCGATTGAGAGGAGACCCAAAAGGGTGTGGCGACCATAGGTACGAGCTAGCTTGTGAGAATAATGTAACCGTGTTATATTTGTACTCGGGAAAATATGATGTGCAGGCAATCAACTACAATAATTTCACAATCCGACTGACGGATCCTGGACTGCAGCAGCCAAACTGCTCCTCCCTTCCTCGCTATTTTTTGTCTCAATCCAATTTCACTTTTAGTACTTACTACAGCCGCATCTCGGATCCCTACCAAGCATATGAAGATTTTTCTGGCCCGATGCTTTTCCAGTATATAGTTTGGTTGAATTGTAGCCATCCTGTTAGCAGGAACAGAAAGTATGTGGATACTGGTGGGTGCGTGAATGGGTACATATACGCCATGGCTGGTCACTTAAGTGCCGGGGACTTAGAAGTTGGTTGTGAGGTAAAGCTGGTTGCTCGTACATCCTGGTGGGGTTTGGACACAAATAAGTATTCCTATTCCTATGCCATCATCCACAGAGCGCTACTCTATGGATTCCAGCTTTCATGGATTCCTGTAGCCTGTGAGGATCACTGTAATAAAAGATATTGCGATTTCAACTCTTCCACCGACACTCTTCGATGCTTGGAAGAAGGTCGTACAGGGTGGGGGCGGCAGCTGCTATCTTTTGTAGGAGGAGTGTTTGAAATAACTGGATCAGACTACCATTATTCTGATACTACCATTTATGAATCAGCGTCATTAACCTTCGGACACTACGTTGTACCATACTTAATAGTCAGATATTTAGTTGGAATGATATTGTTTATTGTTCTTTTGATATACAAGTGGAGAAAAAGACATTTGTCGATATATGAAAATATTGAAACTTATTTGGAGCAAAATAACTTCATGCCCATTCGATACACATACAAGGAAATCAAGAAGATGACTACAAGTTTTAAAGAAAAATTGGGAGAAGGAGGTTATGGCTCTGTGTTTAAGGGAAAGTTGCGTAGTGGACCTTACGTCGCAATAAAAATGTTGGCTAAATCAAAGGGTAATGGACAGGATTTTATCAATGAAGTTGCAACAATTGGAAGAACGCATCATCAAAATGTAGTGGAATTAATTGGGTATTGTGTGGAGGGTTCAAAACGTGCCCTTGTATATAAATTCATGTCCAATGGATCTCTTGACAAATTCATATTTTCCAAGGATGAAAGTGTACATTTGAGCTATGACACAATATACAATATAGCAATTGGGGTAGCACGTGGGATTTCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAACCCCATAACATTCTGCTCGATGAAAAGTTCACCCCAAAGATCTCTGACTTCGGATTGGCAAAACTATATCCAATAGACAACAGCATTGTGACTATGACAGCAGCAAGAGGAACAATTGGGTACATGGCTCCAGAATTGTTTTACCAAAATATTGGGAGGATATCGCATAAGTCTGATGTTTATAGCTTTGGAATGCTTCTGATGGAGATGACAAGCAAGAGAAAAAACCTAAACCCCCATGCAGATCATTCTAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAATGATATAGAAATGGAAGATGTCACAGAGGAGGAGAACAAATTAGCAAAAAAGATGATCATAGTTTCACTTTGGTGTATCCAATTGAAACCAAATGATCGTCCCTCAATCAATAAAGTAGTCGAAATGCTTGAAGGAGACATTGAAAACTTACAAATACCTCCAAAGCCGTCTCTATATCCACATGAAACAGTGGAAGATAACCAAAGAATTGATTATTCCATGCAGATTGCCACCAGTGGTAGCTATGCTAGATGA | 2028 | 0.4014 | MCLQLKLEQKEIGRKMWKERALLVTLVFLIYQSCGSNKEQEHRCPPSSCGKIHNISYPFRLRGDPKGCGDHRYELACENNVTVLYLYSGKYDVQAINYNNFTIRLTDPGLQQPNCSSLPRYFLSQSNFTFSTYYSRISDPYQAYEDFSGPMLFQYIVWLNCSHPVSRNRKYVDTGGCVNGYIYAMAGHLSAGDLEVGCEVKLVARTSWWGLDTNKYSYSYAIIHRALLYGFQLSWIPVACEDHCNKRYCDFNSSTDTLRCLEEGRTGWGRQLLSFVGGVFEITGSDYHYSDTTIYESASLTFGHYVVPYLIVRYLVGMILFIVLLIYKWRKRHLSIYENIETYLEQNNFMPIRYTYKEIKKMTTSFKEKLGEGGYGSVFKGKLRSGPYVAIKMLAKSKGNGQDFINEVATIGRTHHQNVVELIGYCVEGSKRALVYKFMSNGSLDKFIFSKDESVHLSYDTIYNIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFTPKISDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYQNIGRISHKSDVYSFGMLLMEMTSKRKNLNPHADHSSQLYFPFWIYDQLDKENDIEMEDVTEEENKLAKKMIIVSLWCIQLKPNDRPSINKVVEMLEGDIENLQIPPKPSLYPHETVEDNQRIDYSMQIATSGSYAR | 675 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g01398 | 675 | FunFam | serine/threonine-protein kinase PBS1-like | 334 | 438 | - | - | |
Spst8g01398 | 675 | Gene3D | Transferase(Phosphotransferase) domain 1 | 439 | 643 | - | - | |
Spst8g01398 | 675 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 484 | 496 | IPR008271 | GO:0004672|GO:0006468 | |
Spst8g01398 | 675 | SUPERFAMILY | Protein kinase-like (PK-like) | 348 | 635 | IPR011009 | - | |
Spst8g01398 | 675 | Coils | Coil | 584 | 604 | - | - | |
Spst8g01398 | 675 | ProSiteProfiles | Protein kinase domain profile. | 364 | 655 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g01398 | 675 | FunFam | PR5-like receptor kinase | 439 | 646 | - | - | |
Spst8g01398 | 675 | ProSitePatterns | Protein kinases ATP-binding region signature. | 370 | 392 | IPR017441 | GO:0005524 | |
Spst8g01398 | 675 | SMART | serkin_6 | 364 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g01398 | 675 | Gene3D | Phosphorylase Kinase; domain 1 | 338 | 438 | - | - | |
Spst8g01398 | 675 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 337 | 654 | IPR045874 | GO:0004672 | |
Spst8g01398 | 675 | Pfam | Wall-associated receptor kinase galacturonan-binding | 44 | 107 | IPR025287 | GO:0030247 | |
Spst8g01398 | 675 | Pfam | Protein kinase domain | 366 | 632 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g01398 | Spst-Chr8 | 13053437 | 13056603 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g01398 | 12 | 650 | Receptor kinase-like Gene Family | AT5G38260 | 35.445 | 7.32e-117 | 362 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Spst8g01398 | Pkinase | 9.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g01398 | - | - | gmx:100305367 | 941.799 |