Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01398 ATGTGTCTGCAGTTAAAGTTGGAACAGAAAGAGATTGGGCGTAAGATGTGGAAAGAGAGAGCATTATTGGTGACGTTGGTGTTTCTAATATACCAAAGTTGTGGTAGCAACAAGGAGCAAGAGCATAGATGCCCCCCTTCTTCCTGTGGCAAAATCCACAACATATCTTATCCATTCCGATTGAGAGGAGACCCAAAAGGGTGTGGCGACCATAGGTACGAGCTAGCTTGTGAGAATAATGTAACCGTGTTATATTTGTACTCGGGAAAATATGATGTGCAGGCAATCAACTACAATAATTTCACAATCCGACTGACGGATCCTGGACTGCAGCAGCCAAACTGCTCCTCCCTTCCTCGCTATTTTTTGTCTCAATCCAATTTCACTTTTAGTACTTACTACAGCCGCATCTCGGATCCCTACCAAGCATATGAAGATTTTTCTGGCCCGATGCTTTTCCAGTATATAGTTTGGTTGAATTGTAGCCATCCTGTTAGCAGGAACAGAAAGTATGTGGATACTGGTGGGTGCGTGAATGGGTACATATACGCCATGGCTGGTCACTTAAGTGCCGGGGACTTAGAAGTTGGTTGTGAGGTAAAGCTGGTTGCTCGTACATCCTGGTGGGGTTTGGACACAAATAAGTATTCCTATTCCTATGCCATCATCCACAGAGCGCTACTCTATGGATTCCAGCTTTCATGGATTCCTGTAGCCTGTGAGGATCACTGTAATAAAAGATATTGCGATTTCAACTCTTCCACCGACACTCTTCGATGCTTGGAAGAAGGTCGTACAGGGTGGGGGCGGCAGCTGCTATCTTTTGTAGGAGGAGTGTTTGAAATAACTGGATCAGACTACCATTATTCTGATACTACCATTTATGAATCAGCGTCATTAACCTTCGGACACTACGTTGTACCATACTTAATAGTCAGATATTTAGTTGGAATGATATTGTTTATTGTTCTTTTGATATACAAGTGGAGAAAAAGACATTTGTCGATATATGAAAATATTGAAACTTATTTGGAGCAAAATAACTTCATGCCCATTCGATACACATACAAGGAAATCAAGAAGATGACTACAAGTTTTAAAGAAAAATTGGGAGAAGGAGGTTATGGCTCTGTGTTTAAGGGAAAGTTGCGTAGTGGACCTTACGTCGCAATAAAAATGTTGGCTAAATCAAAGGGTAATGGACAGGATTTTATCAATGAAGTTGCAACAATTGGAAGAACGCATCATCAAAATGTAGTGGAATTAATTGGGTATTGTGTGGAGGGTTCAAAACGTGCCCTTGTATATAAATTCATGTCCAATGGATCTCTTGACAAATTCATATTTTCCAAGGATGAAAGTGTACATTTGAGCTATGACACAATATACAATATAGCAATTGGGGTAGCACGTGGGATTTCTTATCTCCACCATGGGTGTGAGATGCAGATTTTGCATTTTGATATCAAACCCCATAACATTCTGCTCGATGAAAAGTTCACCCCAAAGATCTCTGACTTCGGATTGGCAAAACTATATCCAATAGACAACAGCATTGTGACTATGACAGCAGCAAGAGGAACAATTGGGTACATGGCTCCAGAATTGTTTTACCAAAATATTGGGAGGATATCGCATAAGTCTGATGTTTATAGCTTTGGAATGCTTCTGATGGAGATGACAAGCAAGAGAAAAAACCTAAACCCCCATGCAGATCATTCTAGCCAACTTTACTTTCCCTTTTGGATTTATGATCAACTTGACAAAGAGAATGATATAGAAATGGAAGATGTCACAGAGGAGGAGAACAAATTAGCAAAAAAGATGATCATAGTTTCACTTTGGTGTATCCAATTGAAACCAAATGATCGTCCCTCAATCAATAAAGTAGTCGAAATGCTTGAAGGAGACATTGAAAACTTACAAATACCTCCAAAGCCGTCTCTATATCCACATGAAACAGTGGAAGATAACCAAAGAATTGATTATTCCATGCAGATTGCCACCAGTGGTAGCTATGCTAGATGA 2028 0.4014 MCLQLKLEQKEIGRKMWKERALLVTLVFLIYQSCGSNKEQEHRCPPSSCGKIHNISYPFRLRGDPKGCGDHRYELACENNVTVLYLYSGKYDVQAINYNNFTIRLTDPGLQQPNCSSLPRYFLSQSNFTFSTYYSRISDPYQAYEDFSGPMLFQYIVWLNCSHPVSRNRKYVDTGGCVNGYIYAMAGHLSAGDLEVGCEVKLVARTSWWGLDTNKYSYSYAIIHRALLYGFQLSWIPVACEDHCNKRYCDFNSSTDTLRCLEEGRTGWGRQLLSFVGGVFEITGSDYHYSDTTIYESASLTFGHYVVPYLIVRYLVGMILFIVLLIYKWRKRHLSIYENIETYLEQNNFMPIRYTYKEIKKMTTSFKEKLGEGGYGSVFKGKLRSGPYVAIKMLAKSKGNGQDFINEVATIGRTHHQNVVELIGYCVEGSKRALVYKFMSNGSLDKFIFSKDESVHLSYDTIYNIAIGVARGISYLHHGCEMQILHFDIKPHNILLDEKFTPKISDFGLAKLYPIDNSIVTMTAARGTIGYMAPELFYQNIGRISHKSDVYSFGMLLMEMTSKRKNLNPHADHSSQLYFPFWIYDQLDKENDIEMEDVTEEENKLAKKMIIVSLWCIQLKPNDRPSINKVVEMLEGDIENLQIPPKPSLYPHETVEDNQRIDYSMQIATSGSYAR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01398 675 FunFam serine/threonine-protein kinase PBS1-like 334 438 - -
Spst8g01398 675 Gene3D Transferase(Phosphotransferase) domain 1 439 643 - -
Spst8g01398 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Spst8g01398 675 SUPERFAMILY Protein kinase-like (PK-like) 348 635 IPR011009 -
Spst8g01398 675 Coils Coil 584 604 - -
Spst8g01398 675 ProSiteProfiles Protein kinase domain profile. 364 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01398 675 FunFam PR5-like receptor kinase 439 646 - -
Spst8g01398 675 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Spst8g01398 675 SMART serkin_6 364 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01398 675 Gene3D Phosphorylase Kinase; domain 1 338 438 - -
Spst8g01398 675 PANTHER RUST RESISTANCE KINASE LR10-RELATED 337 654 IPR045874 GO:0004672
Spst8g01398 675 Pfam Wall-associated receptor kinase galacturonan-binding 44 107 IPR025287 GO:0030247
Spst8g01398 675 Pfam Protein kinase domain 366 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01398 Spst-Chr8 13053437 13056603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01398 12 650 Receptor kinase-like Gene Family AT5G38260 35.445 7.32e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst8g01398 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01398 - - gmx:100305367 941.799