Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01396 ATGTCGAAGACGAAGGCATTCCAAGGCGTGAACGTGTTCATGTCGCGAAACCTCGTGCCGCCAGAAGTCTTCGACGCGCTGCACGACGCCGTCAAAGATAACGGCGCCCAACTCCACCTCTGCTGCGACCCCTCCCGTAACGGCCCCAACGATTACCACATCATTGCTTCCAGCAAACACGAGAAGTTCGATGACCTCAAATCCAAGGGCTGCAAATTGCTCGGTCCTAGATGTGTTCTTTCGTGTGCCAAAGGAGGAAGGTCTCTGCCTAAACAGGGCTTCACTTGTTGCCTTGCCATGGACGGCGTCAAAGTACTTGCATCTGGCTTTGATATGGAGGAGAAGGTTAAGATAGAAGAGTTAGTGGCTGAAATGGGAGGAGTCCTACACACTAAAACATCATTGGATTTGAACTTTGTCATTGTGAAAAATGTATTAGCTGCAAAGTACAAGGTTCCTTATCAGCTTATGCATTCTATTCTATCTTCCATCTTGTTGTCATCCCCTCCCTACATGGATAAATGTTCCACACAAGCAAAACGGGGAATTGTATACAGTTGTGCATGTTAA 570 0.4754 MSKTKAFQGVNVFMSRNLVPPEVFDALHDAVKDNGAQLHLCCDPSRNGPNDYHIIASSKHEKFDDLKSKGCKLLGPRCVLSCAKGGRSLPKQGFTCCLAMDGVKVLASGFDMEEKVKIEELVAEMGGVLHTKTSLDLNFVIVKNVLAAKYKVPYQLMHSILSSILLSSPPYMDKCSTQAKRGIVYSCAC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01396 189 SUPERFAMILY BRCT domain 59 156 IPR036420 -
Spst8g01396 189 Pfam twin BRCT domain 104 151 IPR001357 -
Spst8g01396 189 Gene3D BRCT domain 96 185 IPR036420 -
Spst8g01396 189 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 8 156 - -
Spst8g01396 189 Gene3D BRCT domain 30 94 IPR036420 -
Spst8g01396 189 CDD BRCT 103 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01396 1 151 Core DNA Replication Machinery Family AT1G77320 71.523 1.57e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01396 K10728 - pvu:PHAVU_002G0782000 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01396 8 13031570 13036293 Spst8g01396 8 13031570 13036293 ECH