Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01395 ATGGTAGAAGGCACACAGAGTGGTCAAAATGTGTGGTGGAGAACTCAGGAATGGTTGATAGAGAAAGGAAGGGAGGAGAAAAGGAGGTGTGAGGCCATGTTTATTGCATCATCTGGTGCAATGGTGGGTTGGGCTTTGAATGAATTGAAGAAACCAATAGTCACGTATGAATGGTTAAAACAATGCTCAGAGGAGCATCGTGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAAAGATTTGTGTTACGGGAATTCCAGCAGATGTCCGTAAAGAGATGGAGAAGCTTATTTTACAAAATGGTGGAAAATACTCCGCAGAATTGACAAAGAATTGCACACATTTGATTTCTGACATATCCTTCTTATAG 381 0.4147 MVEGTQSGQNVWWRTQEWLIEKGREEKRRCEAMFIASSGAMVGWALNELKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLKICVTGIPADVRKEMEKLILQNGGKYSAELTKNCTHLISDISFL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01395 126 SUPERFAMILY BRCT domain 49 122 IPR036420 -
Spst8g01395 126 ProSiteProfiles BRCT domain profile. 74 126 IPR001357 -
Spst8g01395 126 PANTHER REGULATOR OF TY1 TRANSPOSITION PROTEIN 107 35 123 - -
Spst8g01395 126 CDD BRCT_TopBP1_rpt2_like 78 122 - -
Spst8g01395 126 Gene3D BRCT domain 76 124 IPR036420 -
Spst8g01395 126 ProSiteProfiles BRCT domain profile. 52 76 IPR001357 -
Spst8g01395 126 Pfam twin BRCT domain 82 121 IPR001357 -
Spst8g01395 126 Gene3D BRCT domain 15 75 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01395 39 124 Core DNA Replication Machinery Family AT1G77320 67.442 2.57e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01395 K10728 - gmx:100804966 155.992