Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01387 ATGGAAAGCCACATCATATTATTCCTTCCCCTCTTCGTGTCCCTCTTCATCACCATTCTCATACCCGGTGCTGCTCCTTCATCATGCCCAATCAACTTCACCTACGTTCAAACCTTCCCTTGGAACACTTCAACTTGCACAAACCCACTCAACAAACAATCCTGTTGCTCAACCCTCAACACCATCTTCCACATAGGCCTCTCCAAACACCTCAAACTAACCTCTTTTTTTCAACTTCCCAATGAAAACATTTCCTCTATTTGCTTATCAGATTTCCAAGACAAGCTCACAACCATGTCAGTTCACCCATCTATGTACCTTCTTGCTTTCCCAACCCCTCTCAGTGTTGAAACTAGTCAAGATTGGGAACAAAAGGTGGACTCGATTAGACTTAGCCCGGTACACACTTTCTGCAAAGGAGATCTTCATGACCAAACTAGCTGTAACAATTGCATTGCAGCTAGCTTGAAAGTGGCTCTTCAGCTTACTAGTTCTGACCCAAATGCTAGTGACTCGGATTGCTTTTCATTCGCATCGCTGTATGCTGCAGCGGTTGTTAATCCAGAAGGTACAACTGATGTGAACACGATTGGTTGCATATTGAGCGTGCCACTTTCTAGTGAAGTGGCAAAAGGGTCATCGAATAAGAGACGAAAAGTTATGAAGGTGGTTTTTGCATTATTGGGAGCTATTGTGGGGGTTGTGATTGTTTTTGTGCTGATGGTGGTTATGTACAGGAACTGGGACAAGAGAAGGAAGGAAAATGTTTATCACAGGGAGATTGAAAACGGTGTCAGGAACAGTGTTTTGACGAACACTGGTGCGAAATGGTTTCACATATCGGAGCTTGCACGTGCCACTGATAGATTTTCGCAGAGGAATAAGGTTGGTCAAGGTGGTGATGGGGTTGTGTACAAAGGGAAGCTCGGGGATGGCACTTTGATTGCTGTTAAGGAGAATTTAAATTTGGAAAGTAAAGGGGATGAAGAGTTCTGCTATGAAGTGGATATCATAAGCAAAATAAAGCACATGAATCTTCTTGCTCTTCGGGGTTGTTGCATATCAAGTGATAGTTTGAAAGGTAAGAGGAGGTTTCTGGTTTATGATTTCATGGCTAATGGCAACCTCAATTACCAACTGTCACTTACTGGGGATAATAGGTTAACATGGCCACAAAGGAAGAACATAATCCTTGATGTGGCAAAGGGGCTTGCTTATTTGCATTATGAAATCAAACCTCCAATTTATCATCGTGACATAAAGGCTACCAACATACTTTTGGACTCCAAAATGAATGCAAAATTGGCAGATTTTGGGTTGGCCACGCAAGGTAGTGAGGACCAGTCTTCTCTCACCACAAGGGTTGCTGGCACATATGGTTATGTGGCACCCGAGTATGCTTTATATGGGCAACTAACTGAGAAAAGTGATGTTTACAGTTTCGGTATTGTGATTCTGGAAATCATGAGTGGAAGAAAAGTTATTGATACTTTGAATTCATCTGCAGATGCAATCACGGATTGGGTATGGACACTTGCAGAATCGGGAAAGATGCGGGAAATATTTGATGAGTCAATAAGAGAAGGGCCATGGAAAATTATGGAAAGGTTTGTTCATGTTGGAATGCTATGTGCTCACGCAATGGTGGCGTTAAGGCCTACTATTGCTGAGGTCCTTAAGATGTTAGAGGGTGACACTGACGTTCCCAAACTACCAGATAGGCCAGTTCCTTTGGGTCATGCGTCCTTTCAATCTTCTCTGTTGCATGGTTTGCAAAGAAGTGGAAGATCTATGCAACATGTTTCATCCTATTCATGA 1818 0.4279 MESHIILFLPLFVSLFITILIPGAAPSSCPINFTYVQTFPWNTSTCTNPLNKQSCCSTLNTIFHIGLSKHLKLTSFFQLPNENISSICLSDFQDKLTTMSVHPSMYLLAFPTPLSVETSQDWEQKVDSIRLSPVHTFCKGDLHDQTSCNNCIAASLKVALQLTSSDPNASDSDCFSFASLYAAAVVNPEGTTDVNTIGCILSVPLSSEVAKGSSNKRRKVMKVVFALLGAIVGVVIVFVLMVVMYRNWDKRRKENVYHREIENGVRNSVLTNTGAKWFHISELARATDRFSQRNKVGQGGDGVVYKGKLGDGTLIAVKENLNLESKGDEEFCYEVDIISKIKHMNLLALRGCCISSDSLKGKRRFLVYDFMANGNLNYQLSLTGDNRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMNAKLADFGLATQGSEDQSSLTTRVAGTYGYVAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVIDTLNSSADAITDWVWTLAESGKMREIFDESIREGPWKIMERFVHVGMLCAHAMVALRPTIAEVLKMLEGDTDVPKLPDRPVPLGHASFQSSLLHGLQRSGRSMQHVSSYS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01387 605 Gene3D Transferase(Phosphotransferase) domain 1 371 570 - -
Spst8g01387 605 Pfam SPARK 25 175 IPR043891 -
Spst8g01387 605 ProSiteProfiles Protein kinase domain profile. 290 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01387 605 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 371 570 - -
Spst8g01387 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 108 581 - -
Spst8g01387 605 Gene3D Phosphorylase Kinase; domain 1 251 370 - -
Spst8g01387 605 FunFam Receptor-like serine/threonine-protein kinase At4g25390 255 370 - -
Spst8g01387 605 SMART serkin_6 290 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01387 605 SUPERFAMILY Protein kinase-like (PK-like) 269 563 IPR011009 -
Spst8g01387 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Spst8g01387 605 Pfam Protein kinase domain 291 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01387 Spst-Chr8 12956179 12958025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01387 25 592 Receptor kinase-like Gene Family AT1G11050 46.952 3.88e-174 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Spst8g01387 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01387 - - gmx:100798901 924.465