Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01386 ATGGAGAACCAAGTGATGCTCCTTCCCCTCCTCGCGACCCTCTTCACCATTCTCATAGCTGATGTTGCATCTGCTTCATGCCCCATGGATCTCACCTATGTTCAGACCATTCCCTGGAACACTTCAATCTGCAAAGACCCTATTGATGAAGGTCCCTGCTGCCAAACACTCTCCAGCATCTTCGGCATAGGCCTTGCTGAACGTCTCAAAGAAACATCCATATTTTACCTTCCTGATGTTAACACTTCCTCCACTTGCTTATCTGATTTCAAACACCAACTCGCAGCCATCTCAATAAAACCAAACATAGTCCCTCTTTGCTTCCCTGACCCAACCCAGTTTGTTACTAACTCTTCAGCTTGTGCAGGGATTAGAACCCTACAAGATTGGAACCAAAAGGTGGGCATGGATAGTCCAGTGAATACATCATGCAAAGGGGACCTAAAAGACCAAAATCTCTGCAGTATCTGCTCTGACGCTGCTTTGGAATTGATTACCAATCTGACCCGTATTGACCCCAATGCTAATGCCAGCAAATGCTTTTACTACGTAGTTTTGTTTGCTGCAGCTGTTGCTAATCCGTTTGGCACAACAGATCTAAGCGCTACTGGATGCATACTTGGCTTGCCACAACCATCTAATGCAGTAATAAGAGGGTCATCAAATAAGAGAGGAAAAGTGATCAAGCTAGTTTTTTCGTTATTGGCTGCTGTTATTGGTGTTGTGCTTGCTTTTGTACTGATGGTCGTGTACAGGAAGTGGAATAAGAGAAGGAAGGAGAATGTTCATCACAGGGAAATTGAAAACGAGGTCAGGGCCAGTGTTTTACCAATAACTGGTGCCAAATGGTTTCACATATCAGAGCTTGAACATGCCACGAGTAAATTTTCTCAGAGCAATATGATTGGCCAAGGTGGTGATGGGGTTGTATACAAGGGAACTCTTTTAGATGGAACTGAAGTTGCAATTAAGGAAATTTTTTATTTGGAAACTGAAGGGGATGAAGAGTTCTGTTATGAACTGAAGATCATAAGCAAAATAAAGCACAAGAATCTTCTTGCTCTTCAAGGTTGTTGCGTTACGAGTGATAATTTGATAGGTAAGAGGAGGTTTTGGGTTTATGATTACATGCCTAATGGCAACCTCGATTACCATTTGTCTCTTACTGGGGCTGAAAGGTTAACATGGCTACAAAGAAAGAACATAATCATTGATGTGGCTAAAGGGCTTGCTTATTTGCATTATGAAATCAAACCCCCCATATATCACCGTGACATAAAGGCAACCAACATACTTTTGGATTCCAGAATGAATGCGAAATTGGCAGATTTTAGCTTGGCCAAACAAGGTAGTGAGAGACAGTCTCATCTCACCACAAGGGTTGCGGGCACATATGGTTATTTGGCACCAGAGTATGCTCTGTATGGACAACTAACAGAGAAGAGTGATGTGTACAGTTATGGTATTGTGATTCTGGAAATCATGAGTGGAAGAAAAGTGATTGATACTTTGAATTCATCTGCAGATTCACTGACAGATTGGATATGGACACTTGTGGAATCAGGAAATATGATGGAAATATTTGATGAGTCAATAAGAAAAGGGCCCCAAAAAATTATGAAAAGGTTTGCTATTGTTGGCATGCTATGTGCTCATGCTGTGGTAGCTTTAAGGCCTACTATTGCTGAGGCCCTCAAGATGTTAGAGGGTGACATTGGCATTCCCCCATTACCTAACAGACCAATGCCACTGGGTCATGAGTCATTCCAATCTTCTCTGTTGCATGGTTTACACAGGAGTGGTTGA 1806 0.423 MENQVMLLPLLATLFTILIADVASASCPMDLTYVQTIPWNTSICKDPIDEGPCCQTLSSIFGIGLAERLKETSIFYLPDVNTSSTCLSDFKHQLAAISIKPNIVPLCFPDPTQFVTNSSACAGIRTLQDWNQKVGMDSPVNTSCKGDLKDQNLCSICSDAALELITNLTRIDPNANASKCFYYVVLFAAAVANPFGTTDLSATGCILGLPQPSNAVIRGSSNKRGKVIKLVFSLLAAVIGVVLAFVLMVVYRKWNKRRKENVHHREIENEVRASVLPITGAKWFHISELEHATSKFSQSNMIGQGGDGVVYKGTLLDGTEVAIKEIFYLETEGDEEFCYELKIISKIKHKNLLALQGCCVTSDNLIGKRRFWVYDYMPNGNLDYHLSLTGAERLTWLQRKNIIIDVAKGLAYLHYEIKPPIYHRDIKATNILLDSRMNAKLADFSLAKQGSERQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSYGIVILEIMSGRKVIDTLNSSADSLTDWIWTLVESGNMMEIFDESIRKGPQKIMKRFAIVGMLCAHAVVALRPTIAEALKMLEGDIGIPPLPNRPMPLGHESFQSSLLHGLHRSG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01386 601 FunFam Receptor-like serine/threonine-protein kinase At4g25390 261 376 - -
Spst8g01386 601 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 182 582 - -
Spst8g01386 601 Pfam Protein kinase domain 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01386 601 Pfam SPARK 23 181 IPR043891 -
Spst8g01386 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Spst8g01386 601 Gene3D Transferase(Phosphotransferase) domain 1 377 572 - -
Spst8g01386 601 SMART serkin_6 296 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01386 601 SUPERFAMILY Protein kinase-like (PK-like) 276 569 IPR011009 -
Spst8g01386 601 Gene3D Phosphorylase Kinase; domain 1 254 376 - -
Spst8g01386 601 ProSiteProfiles Protein kinase domain profile. 296 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01386 601 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 377 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01386 Spst-Chr8 12952062 12953867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01386 1 590 Receptor kinase-like Gene Family AT1G11050 46.557 2.58e-180 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Spst8g01386 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01386 - - vra:106763645 860.522