Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01367 ATGGCGTCGAACACCAAGAGCAAAGTTGTGTTTGGTTCAGAAGAAGCTTCAGCCATGGTTGAGCAACTGAGAGCAACGTTTGATTGTGGCAAGACGCATGGCTACGAATGGAGAACTTCCCAGTTGAAGGCCCTCATCGAGTTGACTCAAGAACATGAGAAAGACATAGTTCAAGCTCTTCACTCGGATCTATCCAAGTCCCAAACTGAAGCCTTTGTGCAAGAGGTATTCACTTTAAGAAACATCTATAAAATTGGACATCCTCGTTCAACACTGCACCACATTTTTTTTACTTCTCTGCTTCTCTTACCTCGTCGCGTCATTTTGCCCGCGACACGCATACCAGCAATGTCGTCTCAGGACTCAGATAAAATGAAGTCCAAAGCGAGTGAGTTCGACGCGCCGGCGGCATCGCAGCTCGTCATGGAGCTACGTACAGCCTTCGCTTCGGGCAAAACGCGCAGTTACCAGTGGCGAGTGTCGCAGCTCAAAACGCTAGCGAAACTCGTCGCCGATCACGAGCCGCAGATCGTCGACGCGCTCCGAAACGACCTCGCGAAGCCGCCGCTAGAAACTGTGGCTTACGAGGTGCTGTTGTTTATTCCATTCTCACTGTTACTCTCTGCGTTTTGCTTTGTCTATGTTTCTGGTGCGTGTCGTTTGACCTCGGTAGTGGAAGAGGAATATTTTGAAAGCCGTTCTTCGTTGGTGGATTTCGGTGGGTTTGGTTTGAGCATTAATGGCGCACTCTTGCGTCGCACTTTTAATTGTTATTTGGATGTTGGTGCGGAGCTTGCCCTTTTGGTTGTTCAGAAGCACTTCAATTCTTTCACGCAGTTGACAAAAAGGATCTCAGAAAATATGTGCCAATCAGGGTTAGCTAAACTGATTGCTATGTTGAAAAACTCGTGTAAAGTTGCACTCAAAGAATTGAAACATTGGATAACTCCCGAAAAGGTCAAAACTTCACTCGCAACTTTCCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTGGTGATCTCGGCATGGAACTACCCTTTCCTATTGTCACTTGATCCAGTCATTGGAGCTATTGCCGCTGGTAATGCTGTGGTTTTAAAACCATCAGAAATTTCACCGGCCACATCATCACTGCTGGCAAAACTTCTGGGAGACTACATGGATAACTCATGTATTAGAGTTGTTGAGGGAGCAGTTGATGAAACCTCCGCGTTACTACAGCAAAAATGGGACAAAATTTTCTATACAGGCAATGGACGAGTGGCACGTGTTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAACTCGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCGATTTAAAGGTAGCAACAAGACGAATAATTGCCGGAAAGTGGGGTTGTAATAATGGACAAGCCTGCATTTCTCCTGATTATGTTATAACAACAAAAGAATATGCTCCCAAGTTGGTGGATGCGCTAAAGACTGAATTGGAGAAATTTTATGGGAAGAAGCCAATGGAATCACAAGATTTGTCCCGTATTGTGAACTCCAATCACTTTAATCGCTTGACAAAACTTTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTACGGAGGCGAAAAGGATGAAAGCAAATTGAAGATTAGCCCCACTGTTCTACTGGATGTCCCACGGGATTCTTTGATTATGAGCGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTAGACAAACTGGAAGAAAGCTTTGACGTGATCAATTCAGGACCAAAGCCTCTCGCTGCATATATATTTACGAGTAACAAGAATCTCAAGGAGCGATTTGTTATGAGTATTTCAGCTGGCGGCTTGGTTGTTAATGACACTACTTTACATCTTGCAGTTCATACTTTGCCATTTGGGGGAGTTGGTGAGAGTGGAGTGGGTGCATACCATGGGAAATTCTCGTTTGATGCTTTTAGCCACAAAAAAGCAGTGCTCTATCGCAGTTTTATTGGTGATGCAGCAATAAGGTACCCACCATACACAAGTACAAAGCAAAGATTGCTGAAAGCTCTCATTGGTGGTGGCATACTTGGTATTATTCGTGCCCTGTTTGGTTGGTCCTAG 2130 0.4479 MASNTKSKVVFGSEEASAMVEQLRATFDCGKTHGYEWRTSQLKALIELTQEHEKDIVQALHSDLSKSQTEAFVQEVFTLRNIYKIGHPRSTLHHIFFTSLLLLPRRVILPATRIPAMSSQDSDKMKSKASEFDAPAASQLVMELRTAFASGKTRSYQWRVSQLKTLAKLVADHEPQIVDALRNDLAKPPLETVAYEVLLFIPFSLLLSAFCFVYVSGACRLTSVVEEEYFESRSSLVDFGGFGLSINGALLRRTFNCYLDVGAELALLVVQKHFNSFTQLTKRISENMCQSGLAKLIAMLKNSCKVALKELKHWITPEKVKTSLATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEISPATSSLLAKLLGDYMDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARVVMAAAAKHLTPVVLELGGKSPVVVDSNIDLKVATRRIIAGKWGCNNGQACISPDYVITTKEYAPKLVDALKTELEKFYGKKPMESQDLSRIVNSNHFNRLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYIFTSNKNLKERFVMSISAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFIGDAAIRYPPYTSTKQRLLKALIGGGILGIIRALFGWS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01367 709 PANTHER ALDEHYDE DEHYDROGENASE 296 696 IPR012394 GO:0006081
Spst8g01367 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 280 664 IPR016162 GO:0016491
Spst8g01367 709 SUPERFAMILY ALDH-like 299 680 IPR016161 GO:0016491
Spst8g01367 709 Pfam Aldehyde dehydrogenase family 306 666 IPR015590 GO:0016491
Spst8g01367 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 446 646 IPR016163 GO:0016620
Spst8g01367 709 FunFam Aldehyde dehydrogenase 446 646 - -
Spst8g01367 709 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 442 449 IPR029510 GO:0016491
Spst8g01367 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 108 238 IPR016162 GO:0016491
Spst8g01367 709 SUPERFAMILY ALDH-like 130 203 IPR016161 GO:0016491
Spst8g01367 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 80 IPR016162 GO:0016491
Spst8g01367 709 FunFam Aldehyde dehydrogenase 263 449 - -
Spst8g01367 709 SUPERFAMILY ALDH-like 11 83 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01367 Spst-Chr8 12784823 12793384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01367 296 707 Aldehyde Dehydrogenase Gene Family AT1G44170 76.214 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01367 K00128 - gmx:100816594 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01367 8 12784823 12793384 Spst8g01367 8 12784823 12793384 ECH