Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01365 ATGGAGCTTGGGAATAACCAACAACAGCAACAACAACAACATATTCATGTGTTGGTGGTAGATGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGCAGCCACCTTCCTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGCCTGCTCGATGATGAACTTGATAATGCTTCCTCAACTTCTTCAGAATCATTGCAACAAAACGGAATGAAAGTGAATATGATCATGACAGATTATTGCATGCCAGGAATGAGTGGCTATGATTTACTGAAACGAATCAAGGGATCTTCTTGGAAAGATGTACCAGTAGTCATAATGTCATCAGAAAACGAACCATCCAGAATCAGCATGTGTTTAGAAGGAGGGGCAGAGGAGTTTCTTTTGAAGCCTCTGCAGGCATCAGATTTAAAGAAGCTTCAACCATGCTTTCTGAAATGCTTTGACAATTCTGGTGAAGAAGATACCAGTAGGAACCCTGCAAAGGAAAAGCAACAAAATCAAAACGTGAATGAGGAACTCTGGAAGACATAA 555 0.409 MELGNNQQQQQQQHIHVLVVDDSVIDRKLLERLLRDSSCKAATFLDSGDKALKYLGLLDDELDNASSTSSESLQQNGMKVNMIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENEPSRISMCLEGGAEEFLLKPLQASDLKKLQPCFLKCFDNSGEEDTSRNPAKEKQQNQNVNEELWKT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01365 184 SMART REC_2 15 148 IPR001789 GO:0000160
Spst8g01365 184 CDD REC_typeA_ARR 17 147 - -
Spst8g01365 184 MobiDBLite consensus disorder prediction 158 184 - -
Spst8g01365 184 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 165 IPR045279 GO:0009736
Spst8g01365 184 Gene3D - 2 151 - -
Spst8g01365 184 MobiDBLite consensus disorder prediction 169 184 - -
Spst8g01365 184 ProSiteProfiles Response regulatory domain profile. 16 152 IPR001789 GO:0000160
Spst8g01365 184 Pfam Response regulator receiver domain 17 146 IPR001789 GO:0000160
Spst8g01365 184 SUPERFAMILY CheY-like 14 146 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01365 Spst-Chr8 12775184 12778732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01365 10 153 Response Regulator Gene Family AT2G41310 56.849 5.10e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst8g01365 Response_reg 2.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01365 K14492 - gmx:100790440 272.707