Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01363 ATGGCACAAATTTTTCCAGCAGAAGAGCTGAAGAAGGCCACCGAAAACTATGATGAAAGGTTAATAATTGGCAATGGAGGTTATGGTACTGTTTTCAAAGGAATCCTTCCAAATAATAAGGTTGTTGCTATAAAAAAGTCCAAAGTAGTGGATCAGAGTCAAGTTGAGCAATTCATCAATGAGGTGGTTATTCTCTCCCAAATCAACCATAGGAATGTGGTAAAACTCATAGGTTGTTGTCTAGACACCGAAGTCCCATTGTTGGTGTATGAGTTTGTCAACAATGGCACCCTTTTCCATCATTTGCATGATGAAAATAAGGCGAGTATTATACCTTGGAGGATTCGTCTTAGAATAGCCACAGAGACAGCAAGAGCCCTAACATATTTACATTCGGATGCCTCCACATCTATTATCCACAGAGATGTCAAGAGTGCCAACATTCTATTGGATGACAATTATACTGCCAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCAATTGATCAAGCTGAATTAGCCACATTGGTACAAGGAACTTTTGGTTACTTGGACCCAGAGTACATGCAAACAAGTCGATTAACACAGAAGAGTGATGTATATAGTTTTGGAGTAGTGCTTGTAGAACTACTCACAGGAAAAAAAGCACTGTCCTTTCAGAGATCAGAAGAGGAAAGAAGTCTTTCTATGCTTTTTCTCTCTAACTTGGAAAATAAACGCTTGTTTAAAATTATTGAATTTGGTCTTTTGACTAAAGAAAATAAGATGGAGATCAAGAAATTTGCTATACTTGCAAGCAAGTGCTTGAACCTTAAAGGTGAAGAGAGGCCTAGCATGAAGGAAGTGGCAATGGAGCTTGAAGGGATATGGTTAACAGAGAAGCACCCATAG 894 0.387 MAQIFPAEELKKATENYDERLIIGNGGYGTVFKGILPNNKVVAIKKSKVVDQSQVEQFINEVVILSQINHRNVVKLIGCCLDTEVPLLVYEFVNNGTLFHHLHDENKASIIPWRIRLRIATETARALTYLHSDASTSIIHRDVKSANILLDDNYTAKVSDFGASRLVPIDQAELATLVQGTFGYLDPEYMQTSRLTQKSDVYSFGVVLVELLTGKKALSFQRSEEERSLSMLFLSNLENKRLFKIIEFGLLTKENKMEIKKFAILASKCLNLKGEERPSMKEVAMELEGIWLTEKHP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01363 297 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 290 IPR045274 GO:0007166
Spst8g01363 297 SUPERFAMILY Protein kinase-like (PK-like) 4 288 IPR011009 -
Spst8g01363 297 FunFam Wall-associated receptor kinase 2 93 297 - -
Spst8g01363 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Spst8g01363 297 CDD STKc_IRAK 23 290 - -
Spst8g01363 297 PIRSF ILK 5 296 - -
Spst8g01363 297 Gene3D Transferase(Phosphotransferase) domain 1 93 296 - -
Spst8g01363 297 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Spst8g01363 297 ProSiteProfiles Protein kinase domain profile. 17 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01363 297 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Spst8g01363 297 FunFam Wall-associated receptor kinase 2 1 92 - -
Spst8g01363 297 SMART serkin_6 17 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01363 297 Pfam Protein kinase domain 20 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01363 Spst-Chr8 12755961 12756854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01363 3 296 Receptor kinase-like Gene Family AT1G21230 60.339 3.00e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Spst8g01363 Pkinase 5.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01363 - - gmx:100819535 442.195