Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01359 ATGGGTAGAGAAGTTGTTCGTGAAGAATCTATTAAAAACCCTGGACAACGAAGTAGACTGTGGGATCCTGAGGAAGTCTATGATGTATTGACAAATAATAGAGGAACTGGTGCAGTTGAAGGAATATGTTTTTGCCCTGAGAAGCTTGTTGAGATTTCCATGTCATTCAACAATGTGGAAAAACTTTGGCAAGGAGTACAAAATTTTCGGAGTTTAGAGAAAATTGAACTTCGTGGCTCCAAGAACCTTCTGGAGTGTCCAAAGTTGTCTCATGCACCAAAACTCAAGTATGTAAGTATGCGAGATTGTGAAAGCTTGCCTTATGTTGACCCATCAATCTTCTCCCTCCCCAAGCTTGAAATTTTAAATGTGAGCGGATGCAAATGGCTCAAGAGTCTTTGCAGCAACATTTGGCCACAATATCTCCGAGTATTGTTTTTAGCACATTCTGGTTTGAATGAACTGCCTCCATCAATTTTACATATCAGGAACCTCCATATGTTTTCTTTTCTGATTAATGATGGTCTTGTTGATCTTCCTGAAAACTTTACGGATCAACTTTCGCTTTCTGACTCAAGGGAAGATGAATGTGACACTTTCTTGACCTTGCGTCATTTAATGTCTAGCTCTGGCTTCCAGTCAGATGCCATTGGTAGGATTGAACTTGGATCTAAACATTTGTCAGCAGTAGAATTACAAAATGAAGAAGATGCATCCTCCGATATCGAGACTGCTTTAGTCACCATTGAACTTCCTCCTAATTTGTTGGGTTTCGTTTTCTACTTGGTTGTCTCTAAAGTCCAATCATGCAACATTGGACGCTATGGAAGTATTGGATGTGAATGCTACTTGGAAACTAGCAGGGACGAAAGAATGAATATACGAAGTTTTTTTGTAGAAGAAAATATCTTGTCTAATCATGATCCTCCATTTGGATTTATGGAAGATCACATATTTTTATGGTACTATTGCAAATTAGATTTGGTAGAGACTTGGTGTAGCAGAAACTGTGGTGCCGCTCTGTTGCAATATAAAGATGTGCAGTCAATAGGATGCCTGTGCAAATCCATGGCTTCTTCTAATGTGAGTTGTGCTTCTTTCTCTTCCTCTCAGTTTGTTCCCAAAAGGCATGATGTTTTCATCAGCTTTAGAGGAGAGGACACTCGTAGTGACTTCACTAGCCACCTTCATGCTGCTCTCTGCAGAAACAGCGACATGGATACGTACATCGACTACAGGATTCAGAAAGGAGATGAGGTATGGGCAGAACTGGTGAAAGCCATCAAAGACTCCACTCTCTTTTTGGTTATCTTCTCAGAGAACTATGCCTCCTCCACTTGGTGCTTGAATGAACTTGTTGAACTAATGGAATGCAACAAACAAGAAGATGTAGATGTCATTCCTGTGTTCTACAAAATAGACCCATCTCAGGTACGCACACAGAGTGGGAGTTATCAGAAGGCATTGGCAAAGCACAAGAAGGATGGGAAGGTGACTAAGGAGAGGATGCAGCAGTGGAAGGGTGCTCTCTGTGAAGCAGCCAATTTATCTGGCTTTCATTCAAACACATACAGGACTGAATCTAACTTGATTGAAGACATTATCAAAGTTGTTTTGCAAAAACTAAATCACAAATACGCAAATGACTTCAGAGGACCTTTCATATCTGATGAAAACTATACAAACATTGAATCTTTACTCAAATATGATTCGGAGGAAGTTCGAATCATTGGAATTTGGGGTATGGGAGGGATAAGAAGTCTTTTAGACAAAGCTCTTATCACTATTAATTCAAGCAGTAATTGCATAGATATGCACGATCTCATACAAGAAATGGGTAGAGAAGTTGTTCGTGAAGAATCTATTAAAAACCCTGGACAACGAAGTAGACTGTGGGATCCTGAGGAAGTCTATGATGTATTGACAAATAATAGAGGAACTGGTGCAATTGAAGGAATATGGTTAGATATAACACAAAATACAAATATAAATTTAAGCTCTAAAGCATTCAGAAAGATGCCAAACTTGAGATTACTTGCTTTCCAATCCTCCAATGAAGACTCTGAGATAATTAACTCACTGTACCTCCCAAAGGGTCTTCAATTCTTACCTAAAAACTTAAGATATTTGGAGTGGAATGGATATCCACTAAAATCTCTACCATCAAGTTTTTTCCCTGAGAAGCTTGTTGAGATTTCCATGCCATTCAGCAATGTGGAAAAACTTTGGCAAGGAGTACTAAATTTCCCAAGTTTAGAGAAAATTGAACTTCGTGGCTCCAAGAACCTTTTGGAGTGTCCAAAGTTGTCTCATGCACCAAAACTCAAGTATGTTAGTATGCGAGATTGTGAAAGCTTGCCTTATGTTGATCAATCAATCTTCTCCCTCCCCAAGCTTGAAACTTTAAATGTGAGCGGATGCAAATCGCTTAAGAGTCTTAGCAGCAACATTTGGCCACAATATCTCCGAGTATTGTTTTTAGCACATTCTGGTTTGAATGAACTGCCTCCATCAATTTTGCATATCAGGAACCTCCATATATTTTCTTTTCTGATTAATGATGATCTTGCGGATCTTCCTGAAAACTTTACGGATCAACTTTCGCTTTCCGACTCGAGGGAAGATGAATGTGACACTTTCTTGACCTTGCATCATTTGATGTCTAGCTCAGGCTTCCAGTCTGTAACAAGTCTTGCATTTTACAATTGTCAAAGCTTGTGTGAAATCCCAGATAACATCTCCTTGTTATCATCATTGAAATGCTTTAGCTTACGTTATAGCACCATCATTAGCTTACCCGAAAGCTTTAAGTATCTTCCAAGGCTCAAACTTCTTGAAGTTGGTAACTGTAAAATGCTTCAGCATATACATGCACTCCCACAATCCATTCAGTTATTTTATGTCTGGAACTGTGAATCTCTTCAAACAGTGTTAAGTTCAACGGTTGAATCATCCAAAATACCCAAATGTAGTTATCTGCTCCCTAATTGTTTAAAATTGGATGAACATTCATATGATGCAATTTTGAAAGATGCTATTGTTAGGATTGAACTTGGATCAAAACATTTGTCAGCAGTAGGATTGCAAAATGAAGAAGATGGATCCTCGGATAATGAGATGGGTGATTTTTATTTTTTTCAATTAGCAAGAAATGGTAAGATTTGCTACTGTTTACCAGCTAGAAATGGCAGTGTTCAAGATTGGTTGCATTACCACTTTACACAAGATTTGGTCACCATTGAACTTCCTCCTAATTTGTTGGGTTTCATTTTCTACTTGGTTGTTTCTGAAGTCCAATCATGCAACATTGGACGCTATGGAAGTATTGGATGTGAATGCTACTTGGAAACTAGCAGGGACGAAAGAATGAGTATACCAAGTTTCTTTGTAGAAGAAAATATCTTGTCTAATCATGATCCTCCATTTGGATTTATGGAAGATCACATATTTTTATGGTATGATGCCCAATGTTGCAAGAAGATAATGGAAGTAATTAAAGAAGAGAAAGCCATTGATGACAAGAGCAATATTCATCATCCAAAGGTTACATTTAAATTCTTCGCTCAAACCGAAGATAGCAGTGAAGCGATGGTCATAAAAGAGTGTGGGTTTCGTTGGATGCATTCCTTAGAAGAAGGAGGATTCGAATTCAAGAAAAACAAGGATATTCATGGAGTAGAAGAAGCCAACAGTTTCCCAAAAGTTGAGGACTCTAAGTCTAACGTGCAAGAAGGAACATTTCTCCCAACAAAAAAAATTAAGCAACAAGAAGGAACAGAAGACTTGAGGTACGTTCTCGAAGAACTATTGCATATTGGATTTGGTGGAGACATCGTGTAG 3840 0.3844 MGREVVREESIKNPGQRSRLWDPEEVYDVLTNNRGTGAVEGICFCPEKLVEISMSFNNVEKLWQGVQNFRSLEKIELRGSKNLLECPKLSHAPKLKYVSMRDCESLPYVDPSIFSLPKLEILNVSGCKWLKSLCSNIWPQYLRVLFLAHSGLNELPPSILHIRNLHMFSFLINDGLVDLPENFTDQLSLSDSREDECDTFLTLRHLMSSSGFQSDAIGRIELGSKHLSAVELQNEEDASSDIETALVTIELPPNLLGFVFYLVVSKVQSCNIGRYGSIGCECYLETSRDERMNIRSFFVEENILSNHDPPFGFMEDHIFLWYYCKLDLVETWCSRNCGAALLQYKDVQSIGCLCKSMASSNVSCASFSSSQFVPKRHDVFISFRGEDTRSDFTSHLHAALCRNSDMDTYIDYRIQKGDEVWAELVKAIKDSTLFLVIFSENYASSTWCLNELVELMECNKQEDVDVIPVFYKIDPSQVRTQSGSYQKALAKHKKDGKVTKERMQQWKGALCEAANLSGFHSNTYRTESNLIEDIIKVVLQKLNHKYANDFRGPFISDENYTNIESLLKYDSEEVRIIGIWGMGGIRSLLDKALITINSSSNCIDMHDLIQEMGREVVREESIKNPGQRSRLWDPEEVYDVLTNNRGTGAIEGIWLDITQNTNINLSSKAFRKMPNLRLLAFQSSNEDSEIINSLYLPKGLQFLPKNLRYLEWNGYPLKSLPSSFFPEKLVEISMPFSNVEKLWQGVLNFPSLEKIELRGSKNLLECPKLSHAPKLKYVSMRDCESLPYVDQSIFSLPKLETLNVSGCKSLKSLSSNIWPQYLRVLFLAHSGLNELPPSILHIRNLHIFSFLINDDLADLPENFTDQLSLSDSREDECDTFLTLHHLMSSSGFQSVTSLAFYNCQSLCEIPDNISLLSSLKCFSLRYSTIISLPESFKYLPRLKLLEVGNCKMLQHIHALPQSIQLFYVWNCESLQTVLSSTVESSKIPKCSYLLPNCLKLDEHSYDAILKDAIVRIELGSKHLSAVGLQNEEDGSSDNEMGDFYFFQLARNGKICYCLPARNGSVQDWLHYHFTQDLVTIELPPNLLGFIFYLVVSEVQSCNIGRYGSIGCECYLETSRDERMSIPSFFVEENILSNHDPPFGFMEDHIFLWYDAQCCKKIMEVIKEEKAIDDKSNIHHPKVTFKFFAQTEDSSEAMVIKECGFRWMHSLEEGGFEFKKNKDIHGVEEANSFPKVEDSKSNVQEGTFLPTKKIKQQEGTEDLRYVLEELLHIGFGGDIV 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01359 1279 Gene3D Ribonuclease Inhibitor 652 819 IPR032675 -
Spst8g01359 1279 Gene3D Ribonuclease Inhibitor 820 1004 IPR032675 -
Spst8g01359 1279 Pfam TIR domain 377 547 IPR000157 GO:0007165
Spst8g01359 1279 SUPERFAMILY Toll/Interleukin receptor TIR domain 367 519 IPR035897 -
Spst8g01359 1279 Pfam Leucine Rich Repeat 728 746 IPR011713 -
Spst8g01359 1279 Pfam Leucine Rich Repeat 48 67 IPR011713 -
Spst8g01359 1279 SUPERFAMILY L domain-like 654 993 - -
Spst8g01359 1279 SMART till_3 376 516 IPR000157 GO:0007165
Spst8g01359 1279 Gene3D - 374 550 IPR035897 -
Spst8g01359 1279 SUPERFAMILY L domain-like 27 703 - -
Spst8g01359 1279 ProSiteProfiles TIR domain profile. 375 542 IPR000157 GO:0007165
Spst8g01359 1279 Gene3D Ribonuclease Inhibitor 27 223 IPR032675 -
Spst8g01359 1279 FunFam Disease resistance protein (TIR-NBS-LRR class) 373 544 - -
Spst8g01359 1279 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 170 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01359 Spst-Chr8 12723860 12733277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01359 584 945 WRKY Transcription Factor Family AT4G12020 35.925 8.33e-48 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01359 - - gmx:100805490 1090.87