Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01337 ATGCAAAAAGCAGAGTCAAGTTCTCTTGCATGCCATAGCACCAAGATGAACTCTCCACCAAAACTCACCCCGAAGAAAAGAGTTTTCAAGAACACCACACCGAGGAAGAACACCACACCAAGGAAGACTAATACCCCGAAGAAGACTAGCACACCGAGGAAGACTCCTGAGAAAAATGGATCAGTTGTTGTTTCCCCAGGATCTGCTCCAAAGATCGATCTGAGGTTGGAGGCAAAATTGTCAGCGGAGGAAGATAGGAGGGTGTATGCAGGAAGGAGAATACATCCATATTTTACCTTGTGGAAGGAAAGGAACCAACGTGAAAAAGCTTTAAATGAGGCTAAGAGGAAAGCGAAAGGAATTCGTGCTGGTGTTCATGTATTCCAAAATGTTCAGGATGATGTCTCACCCACTGACTGGAGTAACTGGACATTCTTGGATAATAACACAGTTGCACATCTTGGTACAGAAAGTTCAAATTTGTCTGTTATGGATGGTTCGGTTGAATCCTTAAATTTTGATAACATGCCTAGTGCTTTGAGACTCTCAAGTACTTCAACCTCTGAGAATATCATGTCTTGTCCAAGTCAACTTTCTATACAGTCAGATAATATGTTGGAAATATCACCACCAAACTCAGCTGTGTTAGAGCAAGAAGAATGTCATTTGAAGTCAGAAGATGTCAAAGTGGACCTGGACTTGAAGGTGAATGAAAATACTTTTTCAGGACATAAGGATATTTTTGAAAAGCCAGATACTGAGCTAAGGAGTAAATTTCTTCAAGAAAGTTTATGGACGCATAAGTACAAGCCAAGAAAAACCTCCGAGGTGTGTGGTAAGGAGCAGGTTCTGAATTTCTTGCGTGACTGGTTGCATCGATGGCATGAAAGATCTTCTCAATGTAGAAAAGGTTCCTCTGACAAGGGTAAAAGTATCAAACATCATGATGATTATGCTTCAAAAGATATTCATGTGGGTTTAGAGAGTGTTCTTTTGATCACAGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTAAGGTTTTAGAGTTCAATGCATCAAGTTGTCGAAACGGGATTACTGTGGAGAATAAGTTAGGAGAATCTGATCCGGGAAAAATCACAAGTTCCTGCAAACCTATAAGGTTGCTTCTAGCCAAGGAGAATGATGAGGAGATTACTTTCAGTTCTGATGAAGCCCACCAAACTTTAGCTCTATTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATCGCTACCATACAACAGTTTGCTAGGAGAGGAAAATGGCCTATTATATTAACCAGCAATAGACATAATGGTGGCCTACGAGGTAGTTTTGCAAGACAACATGTTTCTTTCTCATTGCCATCGCAAGATGAGTTACTTTGCCATATGTACAAGGTTTGCATCACAGAAGAAGTCGACGTTAATCCTCTTCTACTGAAAAAATTCATCCAGTCTTGTGGTGGAGATATTCGTAAAACCATCATGCAACTTCAGTTCTGGTTCCAGAGTAAACAGTATAGCAAAGGTGTATTACACAGCCCTTTTGTTGCATGTCTGCATGCTTTTGACTTGTAA 1617 0.41 MQKAESSSLACHSTKMNSPPKLTPKKRVFKNTTPRKNTTPRKTNTPKKTSTPRKTPEKNGSVVVSPGSAPKIDLRLEAKLSAEEDRRVYAGRRIHPYFTLWKERNQREKALNEAKRKAKGIRAGVHVFQNVQDDVSPTDWSNWTFLDNNTVAHLGTESSNLSVMDGSVESLNFDNMPSALRLSSTSTSENIMSCPSQLSIQSDNMLEISPPNSAVLEQEECHLKSEDVKVDLDLKVNENTFSGHKDIFEKPDTELRSKFLQESLWTHKYKPRKTSEVCGKEQVLNFLRDWLHRWHERSSQCRKGSSDKGKSIKHHDDYASKDIHVGLESVLLITGPIGSGKSAAVYACAQEQGFKVLEFNASSCRNGITVENKLGESDPGKITSSCKPIRLLLAKENDEEITFSSDEAHQTLALFEDVDILFPEDRGCIATIQQFARRGKWPIILTSNRHNGGLRGSFARQHVSFSLPSQDELLCHMYKVCITEEVDVNPLLLKKFIQSCGGDIRKTIMQLQFWFQSKQYSKGVLHSPFVACLHAFDL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01337 538 MobiDBLite consensus disorder prediction 1 68 - -
Spst8g01337 538 MobiDBLite consensus disorder prediction 1 20 - -
Spst8g01337 538 Pfam ATPase family associated with various cellular activities (AAA) 331 423 IPR003959 GO:0005524|GO:0016887
Spst8g01337 538 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 12 518 IPR004582 GO:0006281
Spst8g01337 538 Gene3D - 468 523 - -
Spst8g01337 538 MobiDBLite consensus disorder prediction 33 62 - -
Spst8g01337 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 516 IPR027417 -
Spst8g01337 538 Gene3D - 262 462 IPR027417 -
Spst8g01337 538 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 470 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01337 Spst-Chr8 12542235 12547493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01337 251 513 Core DNA Replication Machinery Family AT5G22010 22.761 1.93e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01337 K26118 - vum:124821504 593.578