Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01333 ATGGAAGATCAAAATGCTTCCAGTGGATTTGGCAAAAATTTCCGCAAGGTTAAACCTTACCTTGCCATGGTGTCCCTTCAGTTTGGTTACTCAGGAATGTACATCATCACCATGGTTTCTTTCAAGCATGGCATGAGCCATTGGGTACTCTCAGTGTACCGTCATATAGTTGCCACACTCATCATGGCCCCTATTGCATTTTTCCTTGAAAGAAAAATACGACCAAAGATGACTCTCCCTGTGTTCCTGAGGCTAGCCGTTCTTGGTTTCGTCGAGCCAGTGCTTGATCAAAACTTGTACAACATGGGGATGAAGAACACCTCAACAACGTTTGCATCGGCCACGGTTAATGTTCTCCCAGCCATTACTTTTATAATGGCACTTATTTTCAGGTTAGAGACAGTGAATTTGAGAAAAATACATAGCGTGGCCAAGGTAATTGGAACCGCAGTAACAGTCTCAGGAGCCATGGTTATGACTTTGTACAAAGGCCCTGCCCTTCAGTTCGCCAAGGGTCAAGCAACCCACCATGAAAGTGGCAGCACCACACAACCCTCTGAACAAAACTGGGTGCTTGGCACAGTAATGCTGCTAGCAAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTTTGAAGATGTACCCGGCAGAGCTTTCAGTCACAGCTTGGATTTGCTTTCTGGGAATTTTTGAGGGTTCAATTGCAACCCTTATATTTGAACGTGATATGAGTGTGTGGTCCATAGGCATCGACTCAAGGCTCCTTGCTTGTGTTTATTCTGGTTTGGTATGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACCAGGGAACGTGGACCTGTGTTTGTGACTTCTTTCAGTCCACTATGTATGATTATCACTGCGGCATTAGGATCCATTGTATTGGCTGAGCAAGTTTACATGGGAAGTGTAATTGGAGCTATTATCATTGTGAGTGGACTTTATACAGTGGTGTGGGGAAAAAGCAAAGACAATGTGAACAAAAGCGAGGCAGAGAAACGTGAGGGCCAAGAATTGCCAATTAAGGACAGTACAGCATCAGGATCAGACATTTTTGACGGCATTGAGATCAATGTTCCAACTGGGGCAGGAAAGAATGTGGTTGCATCACCAAGAACTTAA 1158 0.443 MEDQNASSGFGKNFRKVKPYLAMVSLQFGYSGMYIITMVSFKHGMSHWVLSVYRHIVATLIMAPIAFFLERKIRPKMTLPVFLRLAVLGFVEPVLDQNLYNMGMKNTSTTFASATVNVLPAITFIMALIFRLETVNLRKIHSVAKVIGTAVTVSGAMVMTLYKGPALQFAKGQATHHESGSTTQPSEQNWVLGTVMLLASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGSIATLIFERDMSVWSIGIDSRLLACVYSGLVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVSGLYTVVWGKSKDNVNKSEAEKREGQELPIKDSTASGSDIFDGIEINVPTGAGKNVVASPRT 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01333 385 PANTHER WAT1-RELATED PROTEIN 18 341 IPR030184 GO:0016020|GO:0022857
Spst8g01333 385 MobiDBLite consensus disorder prediction 341 361 - -
Spst8g01333 385 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020
Spst8g01333 385 Pfam EamA-like transporter family 31 151 IPR000620 GO:0016020
Spst8g01333 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Spst8g01333 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01333 Spst-Chr8 12497499 12501398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01333 11 357 Nodulin-like Gene Family AT4G08300 63.714 8.93e-166 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01333 - - gmx:100814921 681.789