Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01332 ATGGAATGTTTTAAGAAGGTGTCTGAATGGTTCTGCAATGCAAAATCATATCTGATAATATTGAGCTTGCAATTTGGCTCTGCTGGCATGTACCTTATCACCATGGATGCTCTCAACAAGGGCATGAGCCATTATGTTTTTGTTGTTTATCGCAATGTCATTGCCTCTGTTGCTCTCGCCCCATTCGCATTTTTCTTTGAAAGGAAAGTTAGGCCGAAGATGACAGTTAGGATATTTTCAGAGATTATGGCAGTGGCTTTTGTCGAGATAATACTTGATCAATGTTTCACCTTCATGGGCATGAAGTACACATCAGCATCATTTGCATCTGCAGTGATGAATTCCGTACCCTCCATTACCTTCGTACTAGCAATCATTTTTAGATTGGAGCGTATGAACCTTAGGGAGGTTGGATGTTTAGCCAAAATAAGTGGCACTGTGATTACTCTTGGAGGTGCTTTTCTAATGGCACTGTACAAAGGTCCTGCTCTTCATTTTGTAGGATCATCAGCCACCAATAATGGCCAGCCTGAGAATGTGAACGACCCTTCTGGAAATCATTGGCTCATTGGTGCATGTTTTCTCCTCATAGGTTGTGCTGGCTTCGCTGCTTTCTACATATTACAAGCTATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACATGGATATGCTTTATAGGTGCACTTCAAAGCAGTGCAGTTAGCATTTTCATGGAGCGCAATAACCCTCATGTCTGGTCTCTAGCCTGGGATTCTAGACTTCTTGCTTATGCATATTCGGGAATAGTAACATCAGCAATCCAATTTTATGTGCAAGGCATGGTTATTAAAACCACCGGGCCAGTGTTTGTGACTGCATTTAATCCCCTGCGTATGATCATAGTAACAGCCTTGGCTTGCTTAGTGCTCTCAGAAAAACTCCACCTTGGAAGCATTATAGGAGGAGTAGTGGTGGTAATAGGGCTTTACCTAGTTGTGTGGGGGAAAGCTAAAGAACAAAAGAAGAAGCATCTGATGCCACCGTCCCCAGAAAAGGTCACCCTACAACGCCAACAACAGCTACCACTTACTGTACTAAAAAATGATGGCAATGATAACAAACCCCAATTGGTCATAATTGGAGACAGAAACCACGACATGGAAGAAGCCAGAGCAGTGAATACAGAGAGCCAGCAACAGTGA 1191 0.4299 MECFKKVSEWFCNAKSYLIILSLQFGSAGMYLITMDALNKGMSHYVFVVYRNVIASVALAPFAFFFERKVRPKMTVRIFSEIMAVAFVEIILDQCFTFMGMKYTSASFASAVMNSVPSITFVLAIIFRLERMNLREVGCLAKISGTVITLGGAFLMALYKGPALHFVGSSATNNGQPENVNDPSGNHWLIGACFLLIGCAGFAAFYILQAITLRKYPAEMSLATWICFIGALQSSAVSIFMERNNPHVWSLAWDSRLLAYAYSGIVTSAIQFYVQGMVIKTTGPVFVTAFNPLRMIIVTALACLVLSEKLHLGSIIGGVVVVIGLYLVVWGKAKEQKKKHLMPPSPEKVTLQRQQQLPLTVLKNDGNDNKPQLVIIGDRNHDMEEARAVNTESQQQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01332 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 334 - -
Spst8g01332 396 MobiDBLite consensus disorder prediction 377 396 - -
Spst8g01332 396 Pfam EamA-like transporter family 27 156 IPR000620 GO:0016020
Spst8g01332 396 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
Spst8g01332 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Spst8g01332 396 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01332 Spst-Chr8 12480683 12485084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01332 15 368 Nodulin-like Gene Family AT1G44800 48.596 1.46e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01332 - - gmx:100813852 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01332 8 12480683 12485084 Spst8g01332 8 12480683 12485084 ECH