Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01330 ATGAGTGATAGTTCATTGCATCGAGAACAGGCGAGACAAGGGTTGCTACAAGATTTTTTTAAAGACAAAGATAAAGGAAGTTGTGAACCGAATTTCCATCTGCCATGGTTAGAAGAAATAAAGAAAAAGATCAAAGAAAACAATGAAGAAGAAATAGAACTGCAAAACTTTGATATGTTTAAGAAAAAGTATGGTGCCAGTTTTGGCAACAAGTTCAATCTGGCAAAGCCTTATTTGTTAACTGTGGGGTTGCAATTTGCAATGGCTGGAACATTCGTCTTCACTAAGGCTTGTTTGGATCATGGAATGAGTCGTTTTGTGTTAACTGTGTATCGCAATGTTATTGCTGCGCTTGCTCTTGCTCCTTTTGCGATTATCTTTGAAAGGAACGTTAGGCCGAAAATGACACTGTCTATCTTCATGCAGATACTAGCCCTTGGATTTCTTGAGCCCGTGATTGACCAAAGCTTCACGAGTTTGGGGATGCAATACACTTCGGCTTCATTTGCATCTGCTATTATGAACGCTGTACCTTCTGTAACCTTTGTCATAGCAGTAATTCTCAGGTTAGAGCATGTAAAGTTGAAGGAGATACGCAGTAAAGCGAAGGTAATTGGAACCTTGGTAACCTTTGGTGGGGCTTTGTTGATGACACTTTACAAAGGCCCCCAAATCAATATTTTTAACCATTCAAACAGTGGTTACCAGAAAGATGAAAGTCACTCCCATGAGGGTCACAAACACTGGGTCACAGGGACCCTATTTTTATGCCTTGGTTGTTTGGCTTGGTCCTGCTTCTACATTTTGCAGTCTATCACAGTAAAAAGGTACCCTGCAGAATTGTCACTGTCATCTATGATATGCTTGGCAGGTGCATTGCAGAGTGCTGTGGTTGCTGTCATTGCAGATCACAACCCTGGTACATGGGCTATTCGTTTCGACTACACCCTCTATGGCCCTCTTTATTCTGGAATAATGAGTTCAGGAATAGCGTATTATGTTCAAGGGCTGGTAATGAAAAGTAGAGGACCAGTGTTCATGACATCCTTTAATCCTCTGTTAATGATAATCGTTGCTACCTTGGGCTCCTTTTTTCTTGGAGAACACCTCTACTTAGGAAGTGTCGTTGGTGCCACCATCATCGTAGTTGGTCTTTACTCAGTGGTGTGGGGTAAAGCCAAAGACTATTCACTCGAACACCCATCAGCAACAGCAACAAAGGAGACAGAAGCACAACAGCTCCCAGTTAGCACATCAACTCATAATAAATAG 1272 0.4175 MSDSSLHREQARQGLLQDFFKDKDKGSCEPNFHLPWLEEIKKKIKENNEEEIELQNFDMFKKKYGASFGNKFNLAKPYLLTVGLQFAMAGTFVFTKACLDHGMSRFVLTVYRNVIAALALAPFAIIFERNVRPKMTLSIFMQILALGFLEPVIDQSFTSLGMQYTSASFASAIMNAVPSVTFVIAVILRLEHVKLKEIRSKAKVIGTLVTFGGALLMTLYKGPQINIFNHSNSGYQKDESHSHEGHKHWVTGTLFLCLGCLAWSCFYILQSITVKRYPAELSLSSMICLAGALQSAVVAVIADHNPGTWAIRFDYTLYGPLYSGIMSSGIAYYVQGLVMKSRGPVFMTSFNPLLMIIVATLGSFFLGEHLYLGSVVGATIIVVGLYSVVWGKAKDYSLEHPSATATKETEAQQLPVSTSTHNK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01330 423 PANTHER WAT1-RELATED PROTEIN 77 396 IPR030184 GO:0016020|GO:0022857
Spst8g01330 423 Pfam EamA-like transporter family 77 218 IPR000620 GO:0016020
Spst8g01330 423 Pfam EamA-like transporter family 252 389 IPR000620 GO:0016020
Spst8g01330 423 MobiDBLite consensus disorder prediction 404 423 - -
Spst8g01330 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 313 393 - -
Spst8g01330 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 111 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01330 Spst-Chr8 12431889 12440780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01330 69 417 Nodulin-like Gene Family AT1G44800 46.705 4.63e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01330 - - gmx:100812238 549.666