Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01329 ATGGAAGAAATATGTGGAGCCAAAGTTGGCAACATGGTCAATAAGGCCAAGCCATATGTGTTAACTGTTGGGTTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTGGTGTTCATTGTGTATCGCAATGCTATTGCTGCATTGGCTCTTGCTCCCTTCGCCTTGATCTTTGAAAGGAAAGTTAGGCCAAAGATGACATGGACTGTCTTCGTACAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGTTTCACTTTCTTGGGGATGCAATACACTTCTGCTTCCTTTGCATCTGCTGTTATGAATGCGGTACCCTCTGTAACCTTCGTGCTTGCAGTAATTCTCAGGTTAGAGCGTGTAAGAATCAAGGAACTACGTAGTCAAGCGAAGGTGGTGGGAACCTTGGTAACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGTCCTCAGTTTGACCTATTTCATCACTCAAACACAACTCACCAACAAGGTGGAAGTCACTCCTCTCAGAATAATCATTCACACTGGGTCACAGGAACTCTCTTCATTTGCCTCGGTTGTCTGGCTTGGTCTTCCTTCTACATATTGCAGTCCATAACGGTGAAAAGGTACCCTGCGGAACTGTCACTGTCATCGTTGATATGCTTGGCAGGTGCATTGCAAAGTGCTGTGGTAGCTCTCATTGCAGATCACAACCCTCGTGCATGGGCGATACGTTTCGACTACACCCTCTATGGCCCTCTATACACTGGAATAATGAGTTCAGGAATAGCATATTATATACAAGGGCTGGTAATGCAAAGCAGAGGCCCAGTATTTGTGACATCATTTAATCCTCTTTGCATGATCATTGTCACTGCTTTGGGCTCCTTTCTTCTTGGAGAACACCTCTACCTTGGAAGTATCATTGGAGGCATCATTATCGCAGTGGGACTTTACTCTGTGGTGTGGGGGAAAGGGAAAGACTATGAAAATGGCACGTCATCTTCACCAGCAAGAACAAAAGAAACAGAAACATTGCAGCTCCCAATTACCTCACCAAATAATAAATAG 1098 0.4472 MEEICGAKVGNMVNKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRLVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFVQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLAVILRLERVRIKELRSQAKVVGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQGGSHSSQNNHSHWVTGTLFICLGCLAWSSFYILQSITVKRYPAELSLSSLICLAGALQSAVVALIADHNPRAWAIRFDYTLYGPLYTGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSFLLGEHLYLGSIIGGIIIAVGLYSVVWGKGKDYENGTSSSPARTKETETLQLPITSPNNK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01329 365 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Spst8g01329 365 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Spst8g01329 365 PANTHER WAT1-RELATED PROTEIN 17 338 IPR030184 GO:0016020|GO:0022857
Spst8g01329 365 MobiDBLite consensus disorder prediction 339 365 - -
Spst8g01329 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Spst8g01329 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01329 Spst-Chr8 12420992 12424322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01329 10 365 Nodulin-like Gene Family AT4G08300 47.059 4.62e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01329 - - gmx:100782997 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01329 8 12420992 12424322 Spst8g01329 8 12420992 12424322 ECH