Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01328 ATGGAGAGAGAATTGCAATGGATTCTTGTTTCAGCAATTTGTGCTTCATCACTCATTAATATACTTGCTCAGAACACTGAATGGCCTCACTCGAACCTTGCCAGTATTGATTATTCAGGTGTTATAAGCATTGATTGTGGTGTAAACGAGGGCTACACTGACAAGAAAACCAACTTGCAGTATCAAGCAGATGATATCAAATTTGGTGAAATCTATTACACATCATCAATTTACAACTTTGACCATGTAAGTCAAATTCAGAAGCAGTTGAACACATTGAGAAGTTTCCCTTATGGGAAGAGAAATTGCTATACCTTGACACCCAAACAGGGAAAGAACAAGAAATACATAATCAGAGCTTACTTTGCATATGGAAACTATGACAACAAACAAAAACCACCAGTTTTTGATTTGCATCTTGGAGTCAATTTCTTCAAGACAATAAACTCTACGGAGGCTGATATTGTTATTCGAGTCGAAGCTATTCATTTTGCATCAACAGAAACAATTGATTTATGCCTTGTGAACATCGATCAAGGGGTGCCCTTCATTTCATTGTTAGAACTATGGCCCTTGGACAATTCCATTTATGAAAGTTCGTTCACTTTGTTAACACTAGATCTCCTCACAAGAGTTAACCTTGGTGCCTCTGAAGATAACAATTCCTTCATCAGGTACACAGATGATATATATGGAAGATCATGGGAAGTTCCAAATAATTATAACGGTAATCTAATGAACACATCATCAGCTATTGATTTGGACAAACTCGTTGATCCTTACAAACTGCCAGCAGAAGTTTTGAGTTCTGCAGTGAAGGCATTAAATTCCAATTCGTTGGAATTCACACTCAATTATGTCATGGATTCTGAGTATTATGTTTATCTTCACTTTTTTGACTGTGAGGATCGGACAAATAAACAAAAACGAAGATTGAATATTGTTATTAATGGTTTTGATGATGATAATAATGTGACACAATTTCTTACTCTTTCATACTGGAAGCCCCAGAGCATAATTCTACCTATAAAACAAGGGGTGGGTATTTGGAAGATATTGATTGAAGCCAACTCTGATTCTGAGTTACCTGCAATGCTTAATGCTCTTGAGATTTACAGAGTAGTACCTCAGTTAGATTCTGCCACCCAACAAGAAGATGTTGATGCTATCTGGCACATCAAAGATTTTTATATGATCTCTAAAATGAATTGGCAAGGAGACCCGTGTGGACCAAAGAATTTTACATGGGAAGGTGTCAATTGCAGCAGTGGGGACAATCCAAGAATCATTTCATTAAACTTGTGCTCAAGCAACTTGTCAGGAGAAATAGATGCCTCATTTTCCAATCTCACATGTTTGGAGACTTTGGATTTATCAAACAACGAATTGACAGGGGAGGTGCCAGAATTTCTCGCAAAACTATCACAATTGAAGCTCCTTAACTTGTCCAGGAATATGTTCACAGGTTCAATTCCTGAGAGTCTAAAGGCAAAGTCATCTAACAACTCTTTGCAATTGAGTTTCAATGGAAATCTCCGTCCCTATCAGACAGAGTCAGGCAAGGGAAACCACCAGAAATTTATTATTCCATTAGTTGCATCTTTAACAGCATTTGTTGCAGTGGTCCTCATAATATCTACCACAATTATGGTGATCTGGAGACTTAGAAAAAAGGGAAAAGTGATTTCTTCAATTTCTGTCAAAGATGAGCTACTGAAATCAACAAATAAAGTATTTTCTTACTCGGAGATTCTTATAATTACTAATAATTTCACAACAATGATTGGGAAAGGAGGATTTGGTAAGGTTTACCAAGGTACTTTAGAGTGTGGCAAAAGAGTTGCCGTGAAGATACTTTCTTCACCATCAGCACAAGGGTATAGGGAGTTTCAATCAGAGGCAAAAGTATTGATGCATGTTCACCATAGAAACGTGGTTTCTCTTTTGGGATACTGTGACGAAGGTGACACTAACGCACTTATTTATGAATATCTCGCAGAAGGGAACCTCCAACAAAAATTATCAGATAAAAACCCAAATTTTTTGGATTGGACTACGAGACTTAAAATTGCTATGGATGCAGTAAATGGGTTGGACTATTTGCATAATGGATGTAAGCCACCCGTAATTCACAGAGACTTAAAAACATCCAACATCTTACTAGACGAAAATATGCATGCCAAGATTTTAGACTTTGGAGTGTCTAGAACTTTTGCCAATGACACTGACACTTATGTCACAACTTTCCCAGCAGGCACACCAGGTTACCTTGATCCTGAATTTTACTGCTCTGGGACTCTCAACAAAAAGAGTGATGTATATAGTTTTGGGATAATCCTTCTAGAGTTAATCACTGGTCAACCAGCATTAAGAGGAACTCCAGAAAATCTCAGTTACATACTTCCTTGGGTTAACAATAAACTCAGAACAGGAAATATCCAAGAAATAGTCGACCCAAGATTACATGGAAAATACAATGCTGCTTCAGCATGGAAATTTATAGGGATAGCCATGTCATGTCTCCCTCAAGTTCCAATTCACAGGCCTGACATAGGGCACATAGCCTTAGAACTAAAGGAGTGTCTGTCTCTTGAATTATCACTTGAAAGGACTGTGAGCGACGTGAGAGATTCTTTGGCCATGAGTTCTAGGCAAATTGAATTCCATTAA 2670 0.3768 MERELQWILVSAICASSLINILAQNTEWPHSNLASIDYSGVISIDCGVNEGYTDKKTNLQYQADDIKFGEIYYTSSIYNFDHVSQIQKQLNTLRSFPYGKRNCYTLTPKQGKNKKYIIRAYFAYGNYDNKQKPPVFDLHLGVNFFKTINSTEADIVIRVEAIHFASTETIDLCLVNIDQGVPFISLLELWPLDNSIYESSFTLLTLDLLTRVNLGASEDNNSFIRYTDDIYGRSWEVPNNYNGNLMNTSSAIDLDKLVDPYKLPAEVLSSAVKALNSNSLEFTLNYVMDSEYYVYLHFFDCEDRTNKQKRRLNIVINGFDDDNNVTQFLTLSYWKPQSIILPIKQGVGIWKILIEANSDSELPAMLNALEIYRVVPQLDSATQQEDVDAIWHIKDFYMISKMNWQGDPCGPKNFTWEGVNCSSGDNPRIISLNLCSSNLSGEIDASFSNLTCLETLDLSNNELTGEVPEFLAKLSQLKLLNLSRNMFTGSIPESLKAKSSNNSLQLSFNGNLRPYQTESGKGNHQKFIIPLVASLTAFVAVVLIISTTIMVIWRLRKKGKVISSISVKDELLKSTNKVFSYSEILIITNNFTTMIGKGGFGKVYQGTLECGKRVAVKILSSPSAQGYREFQSEAKVLMHVHHRNVVSLLGYCDEGDTNALIYEYLAEGNLQQKLSDKNPNFLDWTTRLKIAMDAVNGLDYLHNGCKPPVIHRDLKTSNILLDENMHAKILDFGVSRTFANDTDTYVTTFPAGTPGYLDPEFYCSGTLNKKSDVYSFGIILLELITGQPALRGTPENLSYILPWVNNKLRTGNIQEIVDPRLHGKYNAASAWKFIGIAMSCLPQVPIHRPDIGHIALELKECLSLELSLERTVSDVRDSLAMSSRQIEFH 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01328 889 SUPERFAMILY L domain-like 413 511 - -
Spst8g01328 889 Pfam Malectin-like domain 44 374 IPR024788 -
Spst8g01328 889 FunFam Leucine-rich repeat receptor-like protein kinase 566 664 - -
Spst8g01328 889 ProSitePatterns Protein kinases ATP-binding region signature. 595 617 IPR017441 GO:0005524
Spst8g01328 889 FunFam Lectin-domain containing receptor kinase A4.3 665 874 - -
Spst8g01328 889 CDD STKc_IRAK 595 860 - -
Spst8g01328 889 Gene3D Ribonuclease Inhibitor 385 521 IPR032675 -
Spst8g01328 889 PANTHER OS07G0107800 PROTEIN-RELATED 42 862 - -
Spst8g01328 889 SUPERFAMILY Protein kinase-like (PK-like) 573 855 IPR011009 -
Spst8g01328 889 Gene3D - 206 372 - -
Spst8g01328 889 Gene3D Transferase(Phosphotransferase) domain 1 665 878 - -
Spst8g01328 889 Gene3D Phosphorylase Kinase; domain 1 571 664 - -
Spst8g01328 889 Pfam Leucine rich repeat 431 486 IPR001611 GO:0005515
Spst8g01328 889 SMART serkin_6 589 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01328 889 Pfam Protein tyrosine and serine/threonine kinase 591 793 IPR001245 GO:0004672|GO:0006468
Spst8g01328 889 FunFam Leucine-rich repeat receptor-like kinase 385 516 - -
Spst8g01328 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Spst8g01328 889 ProSiteProfiles Protein kinase domain profile. 589 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01328 Spst-Chr8 12408893 12414581 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01328 37 862 Receptor kinase-like Gene Family AT2G19230 41.905 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst8g01328 Malectin_like 2.1e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01328 - - mtr:11437028 948.347