Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01307 ATGCGGCATTCCATGGATGACAACCCTAATCTTTCTCTCCCTCGCGCCTCTTCCCCTTCCTCTTCGGAATTCTTCAAACAAGTCCAACCTGCTCTCAAGCGCCATCGCCCTCTCGGTTCGACGCAATCGCATAGCTTGAGGCCGAAGCGCTCCATGGTGGCGCAGCGAAATATCTCGAACAAGTCCTACGAGGATCCTCCGTCGATTTCGGACACGTGCACCGATGAAGGTTGCAAGAATAAACCCTCTCTGCAGGTGGAATCTCAGAGTGTCGGTGCGCACAAGAAGCCCCAGGCTCTGACTTTATCTTCAGATATGAAGTTGGATTCTTCTAGGTTAGAAAAGCAAGAAAAAAATGCAAGTTGCAAAAGACCTTCAGGTCCACAAAAGAGGACCTATGACCCTGAGGTGCACAAAGTGACTGACAAGGCTTTGTTTGAGGGAGTCATAAATGGTTCCTTCGGTAATAAGACTGGTAGAGTCAAGGATGATGGATTTATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAAAAGTTGAAAGAACTTGATGGGAACAACCAGACCATGGATGCGAACTGGCTTCGGTTTTATTGGCAGCAAATTCTTTTAGCTGTCAACACAATTTATGAAGAGCGTATTGTGCATTCTGACTTGAAGCCAGCCAACTTCCTCCTTATCAAAGGTTCATTAAAACTGATTGATTTTGGAATAGCCAAAGCAATAATGAGTAATACAACAAACATTCAACGTGACTCACAGGTATTTTATTCTTGTATACATGGTTATCAATCTCAGGTTCTTGTAGCTGGAATCAGGATGATGCAGTTTTAA 852 0.4401 MRHSMDDNPNLSLPRASSPSSSEFFKQVQPALKRHRPLGSTQSHSLRPKRSMVAQRNISNKSYEDPPSISDTCTDEGCKNKPSLQVESQSVGAHKKPQALTLSSDMKLDSSRLEKQEKNASCKRPSGPQKRTYDPEVHKVTDKALFEGVINGSFGNKTGRVKDDGFIYMVLEYGEIDLAHMLSQKLKELDGNNQTMDANWLRFYWQQILLAVNTIYEERIVHSDLKPANFLLIKGSLKLIDFGIAKAIMSNTTNIQRDSQVFYSCIHGYQSQVLVAGIRMMQF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01307 283 MobiDBLite consensus disorder prediction 10 27 - -
Spst8g01307 283 ProSiteProfiles Protein kinase domain profile. 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01307 283 Pfam Protein kinase domain 161 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01307 283 MobiDBLite consensus disorder prediction 36 107 - -
Spst8g01307 283 Gene3D Transferase(Phosphotransferase) domain 1 174 276 - -
Spst8g01307 283 SUPERFAMILY Protein kinase-like (PK-like) 161 252 IPR011009 -
Spst8g01307 283 MobiDBLite consensus disorder prediction 1 135 - -
Spst8g01307 283 PANTHER MIXED LINEAGE PROTEIN KINASE 163 261 - -
Spst8g01307 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Spst8g01307 283 SMART serkin_6 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01307 Spst-Chr8 12195234 12199040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01307 162 250 AGC Kinase Gene Family AT1G30640 34.066 6.12e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Spst8g01307 Pkinase 2.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01307 K08866 - gmx:100816674 226.868