Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01296 ATGGCGGCTTCCGTTGACAACCGTCAGTTCGGCGGTCACATAAACGGCGTCGTTCGCAGTTGCGGACAGGATTTCAAGCCCCCTATGCCGTTGAATTTCGATCTGGATTCCTCCAGCAGCGACGACGACGACGAAAACAACGACGCTTCGTACCTGAAAGACTTCGTACGAAAAGCGAACGCGGAAACCGAGGCGTCGGTCATGGACCCGCGCGACGAGGGAACCGCGGATCAGTGGATCGCACGGAACGCTTCCATGGTCCGGCTCACAGGGAAGCACCCCTTCAACGCGGAGTCCCCCCTTCCGCGCCTCATGCACCACGGCTTCATCACCCCGGTCCCACTCCACTACGTCCGCAACCACGGTCCAGTTCCCAAGGCCAAGTGGGATGAGTGGACCGTCGAAATAACCGGTCTAGTCAAGCGTCCAACCCGGTTCACCATGGACCAACTCGTGTGCGACTTCCCCCACCGCGAGTTCCCCGTCACGCTCGTCTGCGCCGGGAACCGCCGCAAGGAGCAGAACATGGTCAAGCAGACTATCGGCTTCAACTGGGGCTCAGCCGGCGCCTCCACCTCCGTGTGGCGTGGCGTGCCCCTGCGCCACGTGCTGCACCGCTGCGGGATCCTGACACGTGCGAAGGGCGCGCTGCACGTGTGCTTCGAGGGCGCCGAGAATCTCCCCGGCGGCGGCGGGTCCAAGTACGGAACCAGCGTGTCGAGGGAGATGGCCATGGATCCTTCGCGCGACATCATCGTGGCGTACATGCAAAACGGCGAGCCTCTGGCGCCGGATCACGGGTTCCCCGTTCGCATGATTATTCCCGGTTTTATCGGTGGAAGAATGGTGAAGTGGCTCAAACGCATTGTCGTTACTGAACATGAGTGCAACAGTCATTATCATTACAAGGATAACAGAGTTCTCCCTTCCCATGTCGATGCAGAACTTGCCAATGAAGAAGGTTGGTGGTATAAGCCAGAGTATATCATCAATGAGTTGAATATTAACTCAGTGATTACGACGCCGTGTCACGATGAGATATTGCCCATCAACTCATGGACCACGCAGAGGCCTTATGTACTCCGAGGCTACGCATATTCTGGTGGTGGGAGGAAAGTGACACGTGTGGAGGTAACACTGGACGGAGGAGAAACGTGGCACGTGTGCACATTGGACCATCCTGAGAAGCCTAGCAAATATGGAAAGTACTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGCTCGACCTGCTGGGGATCAAAGAGATTGCAGTTCGAGCTTGGGATGAAGGCCTCAACACGCAGCCAGAAAACCTAATTTGGAATGTTATGGGCATGATGAACAACTGTTGGTTTAGAGTGAAAACCAATGTGTGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAACACCCAACCCAGCCAGGAAACCAACCTGGTGGCTGGATGGCGAAGGAAAAACATTTGGAAAAATCACAAGAACCGAAACCAAACCTTAAAAAGAGTGTGTCTACGCCATTCATGAACACTGCCTCAAAAATGTTCTCCATCTCCGAAGTCCAAAAGCATAGCAGCCCTGCCTCGGCTTGGATCATTGTCCATGGTCACGTTTACGACTGCACCAGCTTCCTCAAAGATCACCCTGGTGGCACCGACAGCATCCTCATCAATGCCGGCACTGACTGCACCGAAGAGTTTGACGCCATCCACTCTGACAAAGCAAAGAAAATGCTCGAAGGCTATCGAATCGGCGAGCTCATCACTACAGGTTACACCTCAGACTCGTCGCCGAACAACTCCGTGCATGGAAATTCCGAACTCACCCATCTGGCTCCTATTAAGGAAATCACCACTACACCACCCCTGCCACCACGCAGCGTGGGTTCACCACCCCTATCAGCACGCAGCGTGGCTCTCAACCCACGGGAGAAAATCCCATGCAAGCTAGTGTCAAAGACCTCCATTTCTCACGACGTCAGGCTTTTCCGTTTCGCACTACCCTCAGAGGACCAACTCCTAGGTTTACCAGTGGGTAAGCACATTTTCTTGTGCGCCACCGTGGATGGCAAGCTATGCATGCGAGCCTACACTCCAACAAGTGGCGTGGACGAAGTGGGGTTCTTCGATTTGCTCATCAAGGTTTACTTCAAAGGCGTGCACCCCAAGTTCCCGAACGGAGGGCTCATGTCACAGCATTTGGAGTCTCTCTCCATTGGCTCCATGCTGGAGGTGAAGGGTCCATTGGGACACATAGAGTACACCGGCAGAGGTAACTTCACGGTTCATGGGAAACAGAGATTCGCAAAGAGGTTAGCTATGCTAGCTGGTGGAACCGGGATCACACCAATTTACCAAGTGGCACAAGCGATCCTGAAAGACCCAGAGGACTGCACAGAAATGCATGTGGTGTATGCAAACCGCACAGAGGATGATATTTTGCTGAGAGAGGAATTGGATGCATGGGCGAAGGAACATAGTGAGCGGTTCAAGGTGTGGTACGTCGTGGAAACCGCGAAGGAAGGGTGGGGATACGGTGTAGGGTTCATCACAGAAAGTATCATGAGGGAGCACCTTCCAGAAGCTTCGAGGGATGCCTTGGCACTGACGTGTGGACCACCACCCATGATTCAGTTCGCGGTGCAGCCTAATTTGGAGAAGATGGGGTACGATGTGAAGAATGATTTGCTCGTGTTTTAG 2703 0.5413 MAASVDNRQFGGHINGVVRSCGQDFKPPMPLNFDLDSSSSDDDDENNDASYLKDFVRKANAETEASVMDPRDEGTADQWIARNASMVRLTGKHPFNAESPLPRLMHHGFITPVPLHYVRNHGPVPKAKWDEWTVEITGLVKRPTRFTMDQLVCDFPHREFPVTLVCAGNRRKEQNMVKQTIGFNWGSAGASTSVWRGVPLRHVLHRCGILTRAKGALHVCFEGAENLPGGGGSKYGTSVSREMAMDPSRDIIVAYMQNGEPLAPDHGFPVRMIIPGFIGGRMVKWLKRIVVTEHECNSHYHYKDNRVLPSHVDAELANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYVLRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPSKYGKYWCWCFWSLEVEVLDLLGIKEIAVRAWDEGLNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQPGGWMAKEKHLEKSQEPKPNLKKSVSTPFMNTASKMFSISEVQKHSSPASAWIIVHGHVYDCTSFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKMLEGYRIGELITTGYTSDSSPNNSVHGNSELTHLAPIKEITTTPPLPPRSVGSPPLSARSVALNPREKIPCKLVSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCATVDGKLCMRAYTPTSGVDEVGFFDLLIKVYFKGVHPKFPNGGLMSQHLESLSIGSMLEVKGPLGHIEYTGRGNFTVHGKQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDCTEMHVVYANRTEDDILLREELDAWAKEHSERFKVWYVVETAKEGWGYGVGFITESIMREHLPEASRDALALTCGPPPMIQFAVQPNLEKMGYDVKNDLLVF 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01296 900 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Spst8g01296 900 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Spst8g01296 900 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Spst8g01296 900 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Spst8g01296 900 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 744 894 IPR039261 -
Spst8g01296 900 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Spst8g01296 900 Pfam Oxidoreductase FAD-binding domain 649 755 IPR008333 -
Spst8g01296 900 Gene3D Translation factors 636 750 - -
Spst8g01296 900 FunFam NADH-cytochrome b5 reductase 635 750 - -
Spst8g01296 900 FunFam Nitrate reductase 510 591 - -
Spst8g01296 900 Pfam Oxidoreductase NAD-binding domain 775 882 IPR001433 GO:0016491
Spst8g01296 900 CDD eukary_NR_Moco 72 457 - -
Spst8g01296 900 CDD cyt_b5_reduct_like 649 895 - -
Spst8g01296 900 FunFam Nitrate reductase 332 508 - -
Spst8g01296 900 Gene3D - 332 507 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 812 823 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 741 755 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 675 686 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 696 703 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 774 793 - -
Spst8g01296 900 PRINTS Cytochrome B5 reductase signature 868 876 - -
Spst8g01296 900 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 644 756 IPR017927 GO:0016491
Spst8g01296 900 Gene3D - 91 331 IPR036374 -
Spst8g01296 900 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 138 173 IPR022407 GO:0043546
Spst8g01296 900 Pfam Cytochrome b5-like Heme/Steroid binding domain 520 588 IPR001199 -
Spst8g01296 900 SMART Cyt_b5_2 517 589 IPR001199 -
Spst8g01296 900 PANTHER SULFITE REDUCTASE 62 462 - -
Spst8g01296 900 Gene3D - 510 591 IPR036400 -
Spst8g01296 900 MobiDBLite consensus disorder prediction 29 48 - -
Spst8g01296 900 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 513 593 IPR036400 -
Spst8g01296 900 Pfam Oxidoreductase molybdopterin binding domain 121 300 IPR000572 -
Spst8g01296 900 SUPERFAMILY Riboflavin synthase domain-like 638 756 IPR017938 -
Spst8g01296 900 FunFam Nitrate reductase 73 322 - -
Spst8g01296 900 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Spst8g01296 900 FunFam Nitrate reductase [NADH] 751 900 - -
Spst8g01296 900 Pfam Mo-co oxidoreductase dimerisation domain 328 459 IPR005066 GO:0016491|GO:0030151
Spst8g01296 900 PIRSF Nitr_rd_NADH 17 899 IPR012137 GO:0006809|GO:0042128|GO:0050464
Spst8g01296 900 SUPERFAMILY E set domains 332 459 IPR014756 -
Spst8g01296 900 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 69 330 IPR036374 -
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 844 860 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 774 793 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 548 558 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 800 809 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 868 876 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 696 703 IPR001709 GO:0016491
Spst8g01296 900 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 812 823 IPR001709 GO:0016491
Spst8g01296 900 Gene3D - 751 895 IPR039261 -
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 109 125 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 279 292 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 427 439 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 162 173 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 246 262 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 375 387 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 173 185 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 440 453 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 188 203 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 361 375 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 402 412 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 330 342 IPR008335 GO:0016491
Spst8g01296 900 PRINTS Eukaryotic molybdopterin domain signature 87 101 IPR008335 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01296 Spst-Chr8 12081037 12086280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01296 637 891 NADPH P450 reductases AT5G17770 42.412 4.11e-56 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01296 K10534 - gmx:100813471 1667.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01296 8 12081037 12086280 Spst8g01296 8 12081037 12086280 ECH