Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01292 ATGGACCCGAAGAAGAGCAAGACTCGAGGCAAGAAGCAGCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTTGAATACGACGCCGGACCGTCGTCGTCCTCCTCTTCCTCGACGTCGTTGTCGTCGGTCTACTCGCGCACCATGGAGTTTTACGACCGCACGAGCTTCCGAATCGAGGGTGTAGAGGGCGAGCTCGACCGGATTTGCCGCAGCCTCGGCCTCTCCGGTCCGGATGACTTTTCCATTCCGGCCTCTGCGTGGGCGGCTATGAAGCTCCATTCCTCCTCTGACAGCCTGGCTGGACGGAGCCACGAGGGTAAGGCGTTCGACGAGGAGGCGAAGGAGGAGGAGGAAATTGAAGCGGTGGACAGCGAGGATCGGGCTAGGGTTTTGGACGAGTGTGTTGTTCCTGCTGAGGGTAGTGGTTGCTGTGCCTCCGGAATTAAGGGTTTTCGGCCTCCGATGTTGAAGCCACCTCCGGGGGTTAGGGTTTCGGTGGTGGATGAAACGTGTTCCACGTGGGATTTGTTGCAGGATTTTGCGCCGAAAGGGGAGGAAGGGAAGGAGACTTACGTGGAGTCGAGTTTGTCTTCTGACGATGAACATGAGGACCGAGAAGAAAAGGAAGAGGAGGATGAGGAAGAAGGGGAAGTTGGGGGAGTGAGGGTGGAAAGAGAAAAGGAGGAAAACGCGGCAAGGATTGCGGAGATTGTGGATGAGTTTTCTGGGTTTTCTACTTCGAACGAAGATGATTCTTCTAGCACTACCACGGGCCCTAGTTCTAGTAACATATCTCCCAATGGGAGAATCAAGCGTGTTATTACCGCGGGTAACTGGCAGAAGGGAGACCTTCTGGGGCGTGGTACGTTTGGCACTGTCTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTACTTGATCAAGGGAATCAGGCAAGACAAAGTGTATATCAACTGGAACAGGAAATTGCACTTTTGAGTCAATTTGAACACGAGAATATAGTTCAATACTTTGGCACTGAAATGGATGAGTCAAATTTGTATATCTTTATTGAGTTTGTAACTAAAGGTTCCCTTAGAAACCTCTACCAGAGATATAATCTTCGAGATTCTCAAGTATCTGCATATACAAGGCAGATTTTGCATGGTTTAAAGTATCTCCATGATCGAAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTTAAGCTTTCAGATTTTGGATTGGCAAAGGCAATCAAATTCAATGATGTCAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAAAGGGAAACAAAAAGGTTATGGGCTTCCAGCTGATATATGGAGTCTGGGATGTACTGTGTTAGAGATGTTAACGGGCCAAATTCCGTACTCTCACTTAGAATGTATGCAGGCATTGTTTAGAATTGGAAGAGGTGAGCCCCCTCTTGTGCCAGATGCCCTTTCAAATGATGCACGGGATTTTATCCGGCAGTGTCTTAAAGTTAATCCAGACGAACGTCCCAGTGCTGCTAAACTCTTAAGTCATACCTTTGTCCAGAGGCCACTACTTTCCCAGTCCTCTGGTTCTGCATCTCCTTATACTCGAAGGGGTTAA 1662 0.4844 MDPKKSKTRGKKQQPKLERRNAAKHFEYDAGPSSSSSSSTSLSSVYSRTMEFYDRTSFRIEGVEGELDRICRSLGLSGPDDFSIPASAWAAMKLHSSSDSLAGRSHEGKAFDEEAKEEEEIEAVDSEDRARVLDECVVPAEGSGCCASGIKGFRPPMLKPPPGVRVSVVDETCSTWDLLQDFAPKGEEGKETYVESSLSSDDEHEDREEKEEEDEEEGEVGGVRVEREKEENAARIAEIVDEFSGFSTSNEDDSSSTTTGPSSSNISPNGRIKRVITAGNWQKGDLLGRGTFGTVYEGISEDGFFFAVKQVSLLDQGNQARQSVYQLEQEIALLSQFEHENIVQYFGTEMDESNLYIFIEFVTKGSLRNLYQRYNLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKLSDFGLAKAIKFNDVKSCKGTAFWMAPEVVKGKQKGYGLPADIWSLGCTVLEMLTGQIPYSHLECMQALFRIGRGEPPLVPDALSNDARDFIRQCLKVNPDERPSAAKLLSHTFVQRPLLSQSSGSASPYTRRG 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01292 553 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 25 548 - -
Spst8g01292 553 SMART serkin_6 281 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01292 553 MobiDBLite consensus disorder prediction 182 270 - -
Spst8g01292 553 SUPERFAMILY Protein kinase-like (PK-like) 263 540 IPR011009 -
Spst8g01292 553 MobiDBLite consensus disorder prediction 99 120 - -
Spst8g01292 553 ProSiteProfiles Protein kinase domain profile. 281 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01292 553 Gene3D Transferase(Phosphotransferase) domain 1 278 549 - -
Spst8g01292 553 FunFam Mitogen-activated protein kinase 1, putative, expressed 279 547 - -
Spst8g01292 553 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Spst8g01292 553 MobiDBLite consensus disorder prediction 183 204 - -
Spst8g01292 553 MobiDBLite consensus disorder prediction 220 237 - -
Spst8g01292 553 MobiDBLite consensus disorder prediction 1 42 - -
Spst8g01292 553 MobiDBLite consensus disorder prediction 243 270 - -
Spst8g01292 553 Pfam Protein kinase domain 282 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g01292 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Spst8g01292 553 MobiDBLite consensus disorder prediction 205 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01292 Spst-Chr8 12054148 12061954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01292 150 538 MAP Kinase Kinase Kinase AT4G08500 62.308 2.43e-150 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst8g01292 Pkinase 3.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01292 K13414 - gmx:100819177 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01292 8 12054148 12061954 Spst8g01292 8 12054148 12061954 ECH
Spst8g01292 8 12054148 12061954 Spst9g01240 9 11779867 11785565 PCT