Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01281 ATGGAGGCCTTGAAGTTATTCAAGGAGAGAATCAATAATCACAAGGAGAAATTACTTTCCCTGGCCTCTAATTCGGCAGACATTCAGGCAAAATATGGCCCTTCACTCCGCCATATAACACCAGCAGTCCTCGCCGCTTACCGCTTCTGTTATTGCCGCTGGATTGGCAGTAGAGCTATTGGACTTGGAGTTGATCAAAAAATGCATGCAAATAAACCTTATACAAATGATGAAAGGTATAAGAGAATATTAATGAGTTTGGAGGTTCTCGCGAAAAGGATGGGTATATACGATCCATTCCATCAAGTGAACATGTGGGGTGACAGCTTTAAAATTGATGGAAGCTTGAATTCAATTGCTTCCCCAATGTTCATGATGAAGCCCGGCATGCAGAACAAGTCTGAATGTACTCCTCATGAATCAAGGGAACCTTCTGGAGATGATCAAGAGAATGACAAAGCTGATAGTAAGGTGCTAAGACGTCAAGCTCAAAATCGTGAGGCTGCTCGAAAGTGTCGGCAGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCGTGCAATTGGAGTTGGAGATTGAGAAAGCAAAAAATCAGGGTATGTACATACGCAGTGCACCAGATGTTAGTTATATGGGATCATCCGGAACAATGAACCCAGGGATAACCTTGTTTGAACTTGAATATGGACAATGGATTGAAGAGCAAGATAGACAGAATGTAGAACTGAGAAATGCATTACAAACTCATGAATCTGATATGCAGCTTCATCTACTTGTTGAGAGTTGCTTGAGCCACTACTCAAATCTTTTCAGGATGAAAGCAGAGGCAGCAAAGGCTGATGTCTTTTATTTGATATCTGGTGCATGGAAAACATCAGTGGAACGCCTTTTCCTTTGGATTGGAGGATCTCGTCCATCACAGCTTCTACATATTATTGTACCGCAGCTTGAACCTTTGACTGATCAACAAATTGTGAGAATTAACAACCTCCGGCGTTCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGACAAACTCCAGCAGAGTCTAGTCCACAACATACCATCAGATCCCTTGGTTTTAGGACACTACGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTGGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACACTGCTTCACATGTCAAGGATCCTGACAAGTAGGCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTCCATCGTCTTCGCACTCTTAGTTCTTTATGGACTGCTCAGTCATGTGATCCTTCCTTTTCCACTCACCTCTCAAACTGA 1347 0.4343 MEALKLFKERINNHKEKLLSLASNSADIQAKYGPSLRHITPAVLAAYRFCYCRWIGSRAIGLGVDQKMHANKPYTNDERYKRILMSLEVLAKRMGIYDPFHQVNMWGDSFKIDGSLNSIASPMFMMKPGMQNKSECTPHESREPSGDDQENDKADSKVLRRQAQNREAARKCRQRKKAYVQQLETSRVKLVQLELEIEKAKNQGMYIRSAPDVSYMGSSGTMNPGITLFELEYGQWIEEQDRQNVELRNALQTHESDMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKTSVERLFLWIGGSRPSQLLHIIVPQLEPLTDQQIVRINNLRRSSQQAEDALSLGLDKLQQSLVHNIPSDPLVLGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLLHMSRILTSRQAAQGLLAMGEYFHRLRTLSSLWTAQSCDPSFSTHLSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01281 448 Pfam bZIP transcription factor 156 190 IPR004827 GO:0003700|GO:0006355
Spst8g01281 448 Gene3D - 156 208 - -
Spst8g01281 448 MobiDBLite consensus disorder prediction 136 156 - -
Spst8g01281 448 SUPERFAMILY Leucine zipper domain 158 190 IPR046347 GO:0003700|GO:0006355
Spst8g01281 448 MobiDBLite consensus disorder prediction 127 156 - -
Spst8g01281 448 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 160 175 IPR004827 GO:0003700|GO:0006355
Spst8g01281 448 ProSiteProfiles DOG1 domain profile. 226 436 IPR025422 GO:0006351|GO:0043565
Spst8g01281 448 PANTHER TRANSCRIPTION FACTOR TGA9 90 437 - -
Spst8g01281 448 Pfam Seed dormancy control 246 318 IPR025422 GO:0006351|GO:0043565
Spst8g01281 448 Coils Coil 4 24 - -
Spst8g01281 448 FunFam BZIP family transcription factor 156 205 - -
Spst8g01281 448 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 155 190 IPR004827 GO:0003700|GO:0006355
Spst8g01281 448 SMART brlzneu 153 213 IPR004827 GO:0003700|GO:0006355
Spst8g01281 448 Coils Coil 176 203 - -
Spst8g01281 448 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01281 Spst-Chr8 11927665 11938168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01281 92 441 Calmodulin-binding Proteins AT1G77920 55.068 6.22e-135 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst8g01281 DOG1 4.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01281 K14431 - gmx:100775882 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01281 8 11927665 11938168 Spst9g01224 9 11592400 11595328 PCT