Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g01281 | ATGGAGGCCTTGAAGTTATTCAAGGAGAGAATCAATAATCACAAGGAGAAATTACTTTCCCTGGCCTCTAATTCGGCAGACATTCAGGCAAAATATGGCCCTTCACTCCGCCATATAACACCAGCAGTCCTCGCCGCTTACCGCTTCTGTTATTGCCGCTGGATTGGCAGTAGAGCTATTGGACTTGGAGTTGATCAAAAAATGCATGCAAATAAACCTTATACAAATGATGAAAGGTATAAGAGAATATTAATGAGTTTGGAGGTTCTCGCGAAAAGGATGGGTATATACGATCCATTCCATCAAGTGAACATGTGGGGTGACAGCTTTAAAATTGATGGAAGCTTGAATTCAATTGCTTCCCCAATGTTCATGATGAAGCCCGGCATGCAGAACAAGTCTGAATGTACTCCTCATGAATCAAGGGAACCTTCTGGAGATGATCAAGAGAATGACAAAGCTGATAGTAAGGTGCTAAGACGTCAAGCTCAAAATCGTGAGGCTGCTCGAAAGTGTCGGCAGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCGTGCAATTGGAGTTGGAGATTGAGAAAGCAAAAAATCAGGGTATGTACATACGCAGTGCACCAGATGTTAGTTATATGGGATCATCCGGAACAATGAACCCAGGGATAACCTTGTTTGAACTTGAATATGGACAATGGATTGAAGAGCAAGATAGACAGAATGTAGAACTGAGAAATGCATTACAAACTCATGAATCTGATATGCAGCTTCATCTACTTGTTGAGAGTTGCTTGAGCCACTACTCAAATCTTTTCAGGATGAAAGCAGAGGCAGCAAAGGCTGATGTCTTTTATTTGATATCTGGTGCATGGAAAACATCAGTGGAACGCCTTTTCCTTTGGATTGGAGGATCTCGTCCATCACAGCTTCTACATATTATTGTACCGCAGCTTGAACCTTTGACTGATCAACAAATTGTGAGAATTAACAACCTCCGGCGTTCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGACAAACTCCAGCAGAGTCTAGTCCACAACATACCATCAGATCCCTTGGTTTTAGGACACTACGGGTTTGAGATGGCTGCTGCCATGGACAAAGGTGAAGCACTGGAAGGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACACTGCTTCACATGTCAAGGATCCTGACAAGTAGGCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGAATACTTCCATCGTCTTCGCACTCTTAGTTCTTTATGGACTGCTCAGTCATGTGATCCTTCCTTTTCCACTCACCTCTCAAACTGA | 1347 | 0.4343 | MEALKLFKERINNHKEKLLSLASNSADIQAKYGPSLRHITPAVLAAYRFCYCRWIGSRAIGLGVDQKMHANKPYTNDERYKRILMSLEVLAKRMGIYDPFHQVNMWGDSFKIDGSLNSIASPMFMMKPGMQNKSECTPHESREPSGDDQENDKADSKVLRRQAQNREAARKCRQRKKAYVQQLETSRVKLVQLELEIEKAKNQGMYIRSAPDVSYMGSSGTMNPGITLFELEYGQWIEEQDRQNVELRNALQTHESDMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKTSVERLFLWIGGSRPSQLLHIIVPQLEPLTDQQIVRINNLRRSSQQAEDALSLGLDKLQQSLVHNIPSDPLVLGHYGFEMAAAMDKGEALEGFVNQADHLRQQTLLHMSRILTSRQAAQGLLAMGEYFHRLRTLSSLWTAQSCDPSFSTHLSN | 448 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g01281 | 448 | Pfam | bZIP transcription factor | 156 | 190 | IPR004827 | GO:0003700|GO:0006355 | |
Spst8g01281 | 448 | Gene3D | - | 156 | 208 | - | - | |
Spst8g01281 | 448 | MobiDBLite | consensus disorder prediction | 136 | 156 | - | - | |
Spst8g01281 | 448 | SUPERFAMILY | Leucine zipper domain | 158 | 190 | IPR046347 | GO:0003700|GO:0006355 | |
Spst8g01281 | 448 | MobiDBLite | consensus disorder prediction | 127 | 156 | - | - | |
Spst8g01281 | 448 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 160 | 175 | IPR004827 | GO:0003700|GO:0006355 | |
Spst8g01281 | 448 | ProSiteProfiles | DOG1 domain profile. | 226 | 436 | IPR025422 | GO:0006351|GO:0043565 | |
Spst8g01281 | 448 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 90 | 437 | - | - | |
Spst8g01281 | 448 | Pfam | Seed dormancy control | 246 | 318 | IPR025422 | GO:0006351|GO:0043565 | |
Spst8g01281 | 448 | Coils | Coil | 4 | 24 | - | - | |
Spst8g01281 | 448 | FunFam | BZIP family transcription factor | 156 | 205 | - | - | |
Spst8g01281 | 448 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 155 | 190 | IPR004827 | GO:0003700|GO:0006355 | |
Spst8g01281 | 448 | SMART | brlzneu | 153 | 213 | IPR004827 | GO:0003700|GO:0006355 | |
Spst8g01281 | 448 | Coils | Coil | 176 | 203 | - | - | |
Spst8g01281 | 448 | Coils | Coil | 237 | 257 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g01281 | Spst-Chr8 | 11927665 | 11938168 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g01281 | 92 | 441 | Calmodulin-binding Proteins | AT1G77920 | 55.068 | 6.22e-135 | 391 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Spst8g01281 | DOG1 | 4.7e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g01281 | K14431 | - | gmx:100775882 | 638.262 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst8g01281 | 8 | 11927665 | 11938168 | Spst9g01224 | 9 | 11592400 | 11595328 | PCT |