Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01280 ATGTCTAGAAGGAGCATGGGTCTTCCTCCTAATAGAGCACAGGGTTCACAGTACCCACCTATGGTTAGAGAAAACTCTTTATATAACCTGAACTTTGATGAGGTTCAGAGCCAGTTGGGAAACACAGGGAAGCCTATCCATGATATTAATTTGGATGAGCTTCACAAAAGTGTTATCTCAGGAGAAAGTGGACATCTTGGGCAAGACCCTTCGTCTAATCATCATTCATTTCTTCTTGGGAACATGAACGTTGGTATGCATGCCACCAAAGCCAATAGCATTAGTGAGACTTGGAGAGAAAGTGTTGACCAACAACATATGAACAGGTCCGTAGACACCCTCTTGAAACAACCTTCTTTGGAGGAAAAATCTTTAGAAAATTTTCTAGCTCATGGAGGTGTGATTAATGTTGCTTATCAGAATATTAACGTTGACACTCCGCCCCTGATGGGAATGGATTCAGTAATGTTGCCTCCACACCTTCAACAACAATGGATGCCAATTCCTTCTAACGTCCACCAACCTCATCACGAGCCACGTATAATTGAAAACTGCCACAGTACTTCTCAGTCATTCTACGATAGTCATCTTGGATATTCAGATAATTCAGTGGGAATTCCAATGTCTCCTTCTTTTTCAGATGCCAAGAGTGCTCTAGACCTTTACAAGAAGAGAAAGATCTCCGATGAGATCGAGAGAAGACAGAAAAGAATGGCTAAGAACAGGGAATCTGCTGCAAGATCAAGGGCAAAGAAGCAGGAACACATTACTAGGTTAGAGAACGAGAAGTGTCGCCTTCAGAAACTGACTAGCTGGCGCAAAATGCTGAAGGTACATTCAGCCATCCATATATATTTCCAATTAAATATAAGTTGTGGTTTCTATGTGTTGTGCTAA 897 0.4158 MSRRSMGLPPNRAQGSQYPPMVRENSLYNLNFDEVQSQLGNTGKPIHDINLDELHKSVISGESGHLGQDPSSNHHSFLLGNMNVGMHATKANSISETWRESVDQQHMNRSVDTLLKQPSLEEKSLENFLAHGGVINVAYQNINVDTPPLMGMDSVMLPPHLQQQWMPIPSNVHQPHHEPRIIENCHSTSQSFYDSHLGYSDNSVGIPMSPSFSDAKSALDLYKKRKISDEIERRQKRMAKNRESAARSRAKKQEHITRLENEKCRLQKLTSWRKMLKVHSAIHIYFQLNISCGFYVLC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01280 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Spst8g01280 298 Coils Coil 242 262 - -
Spst8g01280 298 CDD bZIP_plant_BZIP46 233 272 - -
Spst8g01280 298 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 269 IPR043452 GO:0003700|GO:0045893
Spst8g01280 298 Pfam bZIP transcription factor 233 267 IPR004827 GO:0003700|GO:0006355
Spst8g01280 298 SMART brlzneu 229 291 IPR004827 GO:0003700|GO:0006355
Spst8g01280 298 SUPERFAMILY Leucine zipper domain 233 268 IPR046347 GO:0003700|GO:0006355
Spst8g01280 298 Gene3D - 231 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01280 Spst-Chr8 11924404 11925386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01280 21 278 bZIP Transcription Factor Family AT2G41070 31.203 2.22e-22 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst8g01280 bZIP_1 6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01280 K14432 - gmx:100808654 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01280 8 11924404 11925386 Spst8g01280 8 11924404 11925386 ECH